RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 TTTY13Q9BZ97 58 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 C7orf69Q9H7B7 122 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 UBTD1Q9HAC8 227 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 VWC2LB2RUY7 222 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 TEX22C9J3V5 150 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 E7EQL1 145 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 PRO1854Q9UHT4 67 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 TNFRSF18Q9Y5U5 241 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 BPTFQ12830 3046 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 TRAV12-1A0A0B4J245 112 aa6.68□□□□□ -1.34
PCM1-212ENST00000519253 MED13Q9UHV7 2174 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 APC2O95996 2303 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 SRSF2Q01130 221 aaKnown RBP6.67□□□□□ -1.34
PCM1-212ENST00000519253 KLRD1Q13241 179 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 MSRB1Q9NZV6 116 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 EML6Q6ZMW3 1958 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 WI2-2373I1.2A0A1W2PRP0 233 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 MRPL53Q96EL3 112 aaKnown RBP6.67□□□□□ -1.34
PCM1-212ENST00000519253 TRAV26-2A0A0B4J265 109 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 E9PLD3 99 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 ZNF688P0C7X2 276 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 COL8A2P25067 703 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 FOXC1Q12948 553 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 ATP6V0E2Q8NHE4 81 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 LENEPQ9Y5L5 61 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 POLEQ07864 2286 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 GTF3C1Q12789 2109 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 RITA1Q96K30 269 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 AKAP6Q13023 2319 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 NEGR1Q7Z3B1 354 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 DYNAPQ8N1N2 210 aa6.67□□□□□ -1.34
PCM1-212ENST00000519253 GATA1P15976 413 aaPredicted RBP6.66□□□□□ -1.34
PCM1-212ENST00000519253 HLA-DMBP28068 263 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 KHDC1LQ5JSQ8 128 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 C2orf82Q6UX34 121 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 AGPAT4-IT1Q9H0P7 198 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 TP53TG1Q9Y2A0 90 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 TRAV41A0A0B4J266 112 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 UFSP1Q6NVU6 142 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 RAX2Q96IS3 184 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 U3KQK5 164 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 PRSS29PA6NIE9 313 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 M0R2P5 195 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 IGLV1-47P01700 117 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 THBDP07204 575 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 GLMPQ8WWB7 406 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 IGFBPL1Q8WX77 278 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 TEN1Q86WV5 123 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 UTRNP46939 3433 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 FOXI1Q12951 378 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 MEIG1Q5JSS6 88 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 C8orf86Q6ZUL3 223 aa6.66□□□□□ -1.34
PCM1-212ENST00000519253 COL5A1P20908 1838 aaPredicted RBP6.65□□□□□ -1.34
PCM1-212ENST00000519253 NPFFO15130 113 aa6.65□□□□□ -1.34
PCM1-212ENST00000519253 IGLV11-55A0A075B6I3 123 aa6.65□□□□□ -1.34
PCM1-212ENST00000519253 IGHV1-69DA0A0B4J2H0 117 aa6.65□□□□□ -1.34
PCM1-212ENST00000519253 CFHR4Q92496 578 aa6.65□□□□□ -1.34
PCM1-212ENST00000519253 RIF1Q5UIP0 2472 aaKnown RBP6.65□□□□□ -1.34
PCM1-212ENST00000519253 SLC25A20O43772 301 aa6.65□□□□□ -1.34
PCM1-212ENST00000519253 TCTEX1D4Q5JR98 221 aa6.65□□□□□ -1.34
PCM1-212ENST00000519253 PIFOQ8TCI5 191 aa6.65□□□□□ -1.34
PCM1-212ENST00000519253 SPAG8Q99932 426 aaPredicted RBP6.65□□□□□ -1.34
PCM1-212ENST00000519253 SPTBN2O15020 2390 aa6.65□□□□□ -1.34
PCM1-212ENST00000519253 ACACAQ13085 2346 aa6.65□□□□□ -1.35
PCM1-212ENST00000519253 CD28P10747 220 aa6.65□□□□□ -1.35
PCM1-212ENST00000519253 IGLC6P0CF74 106 aa6.65□□□□□ -1.35
PCM1-212ENST00000519253 SPANXB1Q9NS25 103 aaPredicted RBP6.65□□□□□ -1.35
PCM1-212ENST00000519253 C19orf54Q5BKX5 351 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 GATD1Q8NB37 220 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 PRSS33Q8NF86 280 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 PCNX2A6NKB5 2137 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 FAM223BA6NKX1 122 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 IGLV2-11P01706 119 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 NDPQ00604 133 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 GAGE5Q13069 117 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 GAGE6Q13070 117 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 FAM223AQ8IWN6 122 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 NPBQ8NG41 125 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 MOB4Q9Y3A3 225 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 DUSP14O95147 198 aaKnown RBP6.64□□□□□ -1.35
PCM1-212ENST00000519253 DNAL4O96015 105 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 WT1P19544 449 aaPredicted RBP6.64□□□□□ -1.35
PCM1-212ENST00000519253 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 TRGV11A0A075B6L2 103 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 J3QQQ9 107 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 IGKV3-20P01619 116 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 FGF6P10767 208 aa6.64□□□□□ -1.35
PCM1-212ENST00000519253 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 UCNP55089 124 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 LY6EQ16553 131 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 ARFGEF3Q5TH69 2177 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 GAGE12JA6NER3 117 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 GAGE7O76087 117 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 CTSGP08311 255 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 GAGE12FP0CL80 117 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 GAGE12GP0CL81 117 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 GAGE12IP0CL82 117 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 CRYBA4P53673 196 aa6.63□□□□□ -1.35
PCM1-212ENST00000519253 GAGE4Q13068 117 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms