RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 RANP62826 216 aaKnown RBP3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 TMEM183BQ1AE95 376 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 RPEL1Q2QD12 228 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 Q56UQ5 140 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 PDZD11Q5EBL8 140 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 COA6Q5JTJ3 125 aaKnown RBP3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 BRD3OSQ6XYD6 125 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 FAM231DQ6ZW35 169 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 C5orf17Q8NAS9 161 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 ZNF502Q8TBZ5 544 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 CHRDL1Q9BU40 450 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 GPR61Q9BZJ8 451 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 OTORQ9NRC9 128 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 ZNF580Q9UK33 172 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 EPDR1Q9UM22 224 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 MOB4Q9Y3A3 225 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 KLF12Q9Y4X4 402 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 POLQO75417 2590 aa3.61□□□□□ -1.83
CTNNA1-212ENST00000518919 CREBBPQ92793 2442 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 TRBV19A0A075B6N1 114 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 TRBV9A0A0B4J1U6 114 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 TRBV6-1A0A0K0K1D8 114 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 SMIM27A0A1W2PRY6 76 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 PGPA6NDG6 321 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 A6NDX4 124 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 OR2T8A6NH00 312 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 G3V318 75 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 G3V4G9 280 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 GNG7O60262 68 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 CA1P00915 261 aaPredicted RBP3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 LTAP01374 205 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 TCRAP04437 139 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 MSMBP08118 114 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 CTSGP08311 255 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 RHOGP84095 191 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 IBA57Q5T440 356 aaKnown RBP3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 UNQ5815/PRO19632Q6UWF5 114 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 LINC00322Q6ZN03 302 aaPredicted RBP3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 BAGE2Q86Y30 109 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 TMEM183AQ8IXX5 376 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 OR8I2Q8N0Y5 310 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 EXOC3-AS1Q8N2X6 119 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 VN1R17PQ8TDU5 208 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 FMC1Q96HJ9 113 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 HIST1H2BLQ99880 126 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 CHCHD5Q9BSY4 110 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 JPT2Q9H910 190 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 SCRT2Q9NQ03 307 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 ZNF492Q9P255 531 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 PITPNC1Q9UKF7 332 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 TP53TG3Q9ULZ0 132 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 USP9YO00507 2555 aaPredicted RBP3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 SVEP1Q4LDE5 3571 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 UTP20O75691 2785 aaKnown RBP3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 CELSR2Q9HCU4 2923 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 NAV2Q8IVL1 2488 aa3.6□□□□□ -1.83
CTNNA1-212ENST00000518919 AKAP9Q99996 3911 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 CSMD1Q96PZ7 3565 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 IGHV3OR16-12A0A075B7B8 117 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 TRAV30A0A087WSZ9 112 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 TRAV8-1A0A0A6YYK1 113 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 CLPSL1A2RUU4 121 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 C19orf71A6NCJ1 209 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 ZNF705GA8MUZ8 300 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 M0R3E3 92 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 SOCS3O14543 225 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 GATCO43716 136 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 PRB4P10163 310 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 COX6B1P14854 86 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 SLC25A16P16260 332 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 KRTAP10-9P60411 292 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 UBE2G1P62253 170 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 C15orf32Q32M92 178 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 PYY3Q5JQD4 70 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 GDF5OSQ5U4N7 250 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 TMEM136Q6ZRR5 245 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 GOLT1AQ6ZVE7 132 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 BPIFA4PQ86YQ2 179 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 LINC01561Q8N1V8 128 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 OR10D4PQ8NGN7 298 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 SMIM12Q96EX1 92 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 BTF3L4Q96K17 158 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 GPR82Q96P67 336 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 OPRPNQ99935 248 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 RNF24Q9Y225 148 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 TRAPPC1Q9Y5R8 145 aa3.59□□□□□ -1.83
CTNNA1-212ENST00000518919 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.59□□□□□ -1.84
CTNNA1-212ENST00000518919 ABCA12Q86UK0 2595 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 CRYBG3Q68DQ2 2970 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHV3OR16-8A0A075B7F1 116 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 TRAV41A0A0B4J266 112 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 IGHV3-35A0A0C4DH35 117 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 A0A1B0GXF2 115 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 GRIFINA4D1Z8 144 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 IZUMO1RA6ND01 250 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 F2Z2F3 143 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 H3BUX3 64 aa3.58□□□□□ -1.84
CTNNA1-212ENST00000518919 NUPR1O60356 82 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms