RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 PSG9Q00887 426 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 ARFRP1Q13795 201 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 INSL4Q14641 139 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 TMEM187Q14656 261 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 ACOT6Q3I5F7 207 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-207ENST00000518716 FAM74A1Q5RGS3 127 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 Q6ZS49 121 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 CSNK1G2-AS1Q8NCQ2 148 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 DUSP18Q8NEJ0 188 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 OR2A7Q96R45 310 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 GFI1Q99684 422 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 SEC11CQ9BY50 192 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 MS4A6AQ9H2W1 248 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 PPDPFQ9H3Y8 114 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 ACOT13Q9NPJ3 140 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 SCRT2Q9NQ03 307 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 COMMD3Q9UBI1 195 aa4.28□□□□□ -1.72
PABPC1-207ENST00000518716 DEFB131BA0A096LNP1 70 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 C15orf62A8K5M9 175 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 COLCA2A8K830 154 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 FABP5P3A8MUU1 101 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 C16orf90A8MZG2 172 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 K7EPK0 472 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 MFNGO00587 321 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 ZNF207O43670 478 aaKnown RBP4.27□□□□□ -1.73
PABPC1-207ENST00000518716 ATP5LO75964 103 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 CA1P00915 261 aaPredicted RBP4.27□□□□□ -1.73
PABPC1-207ENST00000518716 REG1AP05451 166 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 CTSGP08311 255 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 FCGR3AP08637 254 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 OR5G3P0C626 314 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 EMP1P54849 157 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 AQP4P55087 323 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 C1orf195Q5TG92 126 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 ZNF773Q6PK81 442 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 FAM231DQ6ZW35 169 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 ZNF664Q8N3J9 261 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 NDFIP1Q9BT67 221 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 C1QTNF4Q9BXJ3 329 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 CELA1Q9UNI1 258 aa4.27□□□□□ -1.73
PABPC1-207ENST00000518716 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 IGLV2-18A0A075B6J9 118 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 IGHV3OR16-8A0A075B7F1 116 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 IGKV1D-8A0A087WSZ0 117 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 IGHV7-4-1A0A0J9YVY3 117 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 A0A0U1RQV1 116 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 OR2T8A6NH00 312 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 HLA-DQB1P01920 261 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 SRIP30626 198 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 G6PCP35575 357 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 RPS25P62851 125 aaKnown RBP4.26□□□□□ -1.73
PABPC1-207ENST00000518716 IFITM3Q01628 133 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 HSD52Q0P140 79 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 PPP1R1AQ13522 171 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 MEF2DQ14814 521 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 BATFQ16520 125 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 C1orf134Q5TEV5 83 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 LAIR2Q6ISS4 152 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 MORN3Q6PF18 240 aaPredicted RBP4.26□□□□□ -1.73
PABPC1-207ENST00000518716 PQLC2Q6ZP29 291 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 FAM19A1Q7Z5A9 133 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 TRPT1Q86TN4 253 aaKnown RBP4.26□□□□□ -1.73
PABPC1-207ENST00000518716 C1orf158Q8N1D5 194 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 MS4A15Q8N5U1 240 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 OR10D4PQ8NGN7 298 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 VSTM2AQ8TAG5 236 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 ACY3Q96HD9 319 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 ANAPC13Q9BS18 74 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 RHPN1-AS1Q9BWJ2 59 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 PRO1933Q9H354 126 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 BET1LQ9NYM9 111 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 OR5AC2Q9NZP5 309 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 LAMTOR3Q9UHA4 124 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 PRNDQ9UKY0 176 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 ORC6Q9Y5N6 252 aa4.26□□□□□ -1.73
PABPC1-207ENST00000518716 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 TRAV2A0A0B4J234 112 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 TRAV3A0A0B4J244 114 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 IGKV1D-13A0A0B4J2D9 117 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 IRGMA1A4Y4 181 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 K7EIM0 57 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 SLC17A2O00624 439 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 MBPP02686 304 aaPredicted RBP4.25□□□□□ -1.73
PABPC1-207ENST00000518716 NMBP08949 121 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 AKAIN1P0CW23 69 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 IGKV1-13P0DP09 117 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 DEFA4P12838 97 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 WT1-ASQ06250 92 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 SMAGPQ0VAQ4 97 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 SUMO4Q6EEV6 95 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 THAP8Q8NA92 274 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 OR10G7Q8NGN6 311 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 PHYHIPLQ96FC7 376 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 SLC25A39Q9BZJ4 359 aaPredicted RBP4.25□□□□□ -1.73
PABPC1-207ENST00000518716 SMIM3Q9BZL3 60 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 VSIRQ9H7M9 311 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 TAS2R8Q9NYW2 309 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 TNFSF18Q9UNG2 199 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 CYSLTR1Q9Y271 337 aa4.25□□□□□ -1.73
PABPC1-207ENST00000518716 DUXBA0A1W2PPF3 345 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms