RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 C11orf52Q96A22 123 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 PINX1Q96BK5 328 aaKnown RBP2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 UHRF2Q96PU4 802 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 TXN2Q99757 166 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 DERL1Q9BUN8 251 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 WFDC10AQ9H1F0 79 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 HSPB7Q9UBY9 170 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 CACNG5Q9UF02 275 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 SLC45A2Q9UMX9 530 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 OR51B2Q9Y5P1 312 aa2.23□□□□□ -2.05
SCARNA13-201ENST00000516672 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 IGLV11-55A0A075B6I3 123 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 TRAV10A0A0B4J240 114 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF320A2RRD8 509 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 PGPEP1LA6NFU8 196 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 CGB1A6NKQ9 187 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF705FA8MVS1 300 aaPredicted RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 PRSS46E5RG02 174 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 F6UZH7 168 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 LINC01619G3V211 115 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 K7EN84 100 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 HMGB3O15347 200 aaKnown RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 PAGE4O60829 102 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 HYPMO75409 117 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 SCGB2A1O75556 95 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 TRGV3P03979 118 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 REG1AP05451 166 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF705DP0CH99 300 aaPredicted RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF705BP0CI00 300 aaPredicted RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 DEFA4P12838 97 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ATP5G3P48201 142 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 TPPP2P59282 170 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 RPS20P60866 119 aaKnown RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 PAFAH1B2P68402 229 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 RHOGP84095 191 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 WT1-ASQ06250 92 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 OR5I1Q13606 314 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 KLF5Q13887 457 aaPredicted RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 COTL1Q14019 142 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ECSCRQ19T08 205 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM183BQ1AE95 376 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 DEFB135Q30KP9 77 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 C15orf32Q32M92 178 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 C2orf83Q53S99 150 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 LEMD1Q68G75 181 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 OR8G2PQ6IF36 304 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ETFRF1Q6IPR1 90 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF705AQ6ZN79 300 aaPredicted RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 Q6ZVH6 145 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 GPHB5Q86YW7 130 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 OR5T1Q8NG75 326 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 SCGB1C1Q8TD33 95 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 CACNG8Q8WXS5 425 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 EEF1AKMT3Q96AZ1 226 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 SLC35E1Q96K37 410 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 FANCD2OSQ96PS1 177 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 CIB3Q96Q77 187 aaPredicted RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 OR5B12Q96R08 314 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 RNF2Q99496 336 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 VAMP8Q9BV40 100 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM147Q9BVK8 224 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 GGTLC1Q9BX51 225 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 NPCDR1Q9BY65 106 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 DPH3P1Q9H4G8 78 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 GNB4Q9HAV0 340 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 ENY2Q9NPA8 101 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 KCNIP2Q9NS61 270 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 PSENENQ9NZ42 101 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 IL36BQ9NZH7 164 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 MRPL27Q9P0M9 148 aaKnown RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 PEF1Q9UBV8 284 aaKnown RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 LINC00527Q9UJ94 153 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 PAM16Q9Y3D7 125 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 TRAPPC1Q9Y5R8 145 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 F11RQ9Y624 299 aaKnown RBP2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 COX11Q9Y6N1 276 aa2.22□□□□□ -2.05
SCARNA13-201ENST00000516672 TRAV30A0A087WSZ9 112 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 TRAV3A0A0B4J244 114 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 SCO2A0A1W2PP80 73 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 A0A1W2PS18 150 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 C15orf62A8K5M9 175 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 C9JCJ5 164 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 E7EUB6 86 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 FNDC10F2Z333 226 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 I3L2K1 104 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 K7EMT4 169 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 IGLV2-8P01709 118 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 CLEC3BP05452 202 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 GPX1P07203 203 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 OR5G3P0C626 314 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 OR10J4P0C629 311 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 C3orf79P0CE67 100 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 STAG3L2P0CL84 134 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 STAG3L3P0CL85 134 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 AREGP15514 252 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 TSPOP30536 169 aa2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 CDC34P49427 236 aaPredicted RBP2.21□□□□□ -2.06
SCARNA13-201ENST00000516672 PSMB3P49720 205 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms