RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 C6orf183Q5T699 404 aa-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 COMMD1Q8N668 190 aa-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 TMEM229BQ8NBD8 167 aa-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 DIRAS2Q96HU8 199 aa-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 OR2H1Q9GZK4 316 aa-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 TAF9BQ9HBM6 251 aa-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 NPVFQ9HCQ7 196 aa-4.39□□□□□ -3.11
RNU6-539P-201ENST00000516665 SPTBN5Q9NRC6 3674 aaKnown RBP-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 C3orf85A0A1B0GTC6 90 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 LYPLA2O95372 231 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 BCL2P10415 239 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 RANP62826 216 aaKnown RBP-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 DEFB110Q30KQ9 67 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 CCDC148Q8NFR7 591 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 OR4B1Q8NGF8 309 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 KIAA1143Q96AT1 154 aaPredicted RBP-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 ENY2Q9NPA8 101 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 NUBP2Q9Y5Y2 271 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 S4R3F8 94 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 V9GYV3 84 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 SBF2Q86WG5 1849 aa-4.4□□□□□ -3.11
RNU6-539P-201ENST00000516665 IFT172Q9UG01 1749 aa-4.41□□□□□ -3.11
RNU6-539P-201ENST00000516665 MAGI1Q96QZ7 1491 aaPredicted RBP-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 HLA-DRAP01903 254 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 IL3P08700 152 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 SMIM10L2AP0DMW4 78 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 SMIM10L2BP0DMW5 78 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 HLA-EP13747 358 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 PIGPP57054 158 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 RAB5BP61020 215 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 RHOHQ15669 191 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 EIF5AL1Q6IS14 154 aaKnown RBP-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 SYCE1Q8N0S2 351 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 CLDN22Q8N7P3 220 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 OR10X1Q8NGY0 326 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 FAM172AQ8WUF8 416 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 NPCDR1Q9BY65 106 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 OR51I2Q9H344 312 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 FRMPD1Q5SYB0 1578 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 NISCHQ9Y2I1 1504 aa-4.41□□□□□ -3.12
RNU6-539P-201ENST00000516665 STX10O60499 249 aa-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 IFNGP01579 166 aa-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 ORM1P02763 201 aa-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 RD3LP0DJH9 198 aa-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 SSBP1Q04837 148 aaKnown RBP-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 TMED1Q13445 227 aa-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 CIB3Q96Q77 187 aaPredicted RBP-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 SPANXB1Q9NS25 103 aaPredicted RBP-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 TMEM56-RWDD3S4R434 201 aa-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 PHIPQ8WWQ0 1821 aa-4.42□□□□□ -3.12
RNU6-539P-201ENST00000516665 FGD6Q6ZV73 1430 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 ARL5CA6NH57 179 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 CDC42EP2O14613 210 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 TFF1P04155 84 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 CRYGCP07315 174 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 PVALBP20472 110 aaPredicted RBP-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 DEFA1P59665 94 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 Q5VV11 94 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 OR8J2Q8NGG1 315 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 EFCAB11Q9BUY7 163 aa-4.43□□□□□ -3.12
RNU6-539P-201ENST00000516665 PAPPA2Q9BXP8 1791 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 TRBV10-1A0A0K0K1A3 114 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 CPSF4LA6NMK7 179 aaKnown RBP-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 J3KT08 172 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 CRYZL1O95825 349 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 OR2H2O95918 312 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 HLA-DRB1P01911 266 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 SLC35E2BP0CK96 405 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 RPS20P60866 119 aaKnown RBP-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 ITGB3BPQ13352 177 aaPredicted RBP-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 IAH1Q2TAA2 248 aaPredicted RBP-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 DNAL1Q4LDG9 190 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 COX7B2Q8TF08 81 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 DNAJB3Q8WWF6 145 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 KCTD7Q96MP8 289 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 C20orf27Q9GZN8 174 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 FMN2Q9NZ56 1722 aa-4.44□□□□□ -3.12
RNU6-539P-201ENST00000516665 USP54Q70EL1 1684 aa-4.45□□□□□ -3.12
RNU6-539P-201ENST00000516665 TRAV5A0A0B4J249 113 aa-4.45□□□□□ -3.12
RNU6-539P-201ENST00000516665 SUPT3HB4E1H0 165 aa-4.45□□□□□ -3.12
RNU6-539P-201ENST00000516665 SMR3BP02814 79 aaPredicted RBP-4.45□□□□□ -3.12
RNU6-539P-201ENST00000516665 COPS6Q7L5N1 327 aa-4.45□□□□□ -3.12
RNU6-539P-201ENST00000516665 PPP1R42Q7Z4L9 355 aa-4.45□□□□□ -3.12
RNU6-539P-201ENST00000516665 OR8J3Q8NGG0 315 aa-4.45□□□□□ -3.12
RNU6-539P-201ENST00000516665 NAA60Q9H7X0 242 aa-4.45□□□□□ -3.12
RNU6-539P-201ENST00000516665 APOC1P02654 83 aa-4.46□□□□□ -3.12
RNU6-539P-201ENST00000516665 RSU1Q15404 277 aa-4.46□□□□□ -3.12
RNU6-539P-201ENST00000516665 TAS2R42Q7RTR8 314 aa-4.46□□□□□ -3.12
RNU6-539P-201ENST00000516665 TERF2IPQ9NYB0 399 aa-4.46□□□□□ -3.12
RNU6-539P-201ENST00000516665 CEP164Q9UPV0 1460 aa-4.46□□□□□ -3.12
RNU6-539P-201ENST00000516665 ARFGEF1Q9Y6D6 1849 aa-4.46□□□□□ -3.12
RNU6-539P-201ENST00000516665 GSTTP1A0A1W2PQM5 241 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 TMEM189A5PLL7 270 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 SYS1-DBNDD2H3BUS1 97 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 SERPINA1P01009 418 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 FAM45BPQ6NSW5 357 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 SLC51BQ86UW2 128 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 RNASEH2CQ8TDP1 164 aaKnown RBP-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 BCL7BQ9BQE9 202 aa-4.47□□□□□ -3.13
RNU6-539P-201ENST00000516665 WFDC6Q9BQY6 131 aa-4.47□□□□□ -3.13
Retrieved 100 of 20,778 RNA–protein pairs in 226.2 ms