RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 RBAKDNA6NC62 111 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 HIST1H1TP22492 207 aaPredicted RBP-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 OR2F1Q13607 317 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 NKAIN1Q4KMZ8 207 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 CST9Q5W186 159 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 FAM9BQ8IZU0 186 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 DEFB105AQ8NG35 78 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 ENY2Q9NPA8 101 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 CSMD1Q96PZ7 3565 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 NBEAL2Q6ZNJ1 2754 aa-3.81□□□□□ -3.02
SNORA40.13-201ENST00000516379 CFAP46Q8IYW2 2715 aa-3.82□□□□□ -3.02
SNORA40.13-201ENST00000516379 BBIP1A8MTZ0 92 aa-3.82□□□□□ -3.02
SNORA40.13-201ENST00000516379 LYRM1O43325 122 aa-3.82□□□□□ -3.02
SNORA40.13-201ENST00000516379 RPL12P30050 165 aaKnown RBP-3.82□□□□□ -3.02
SNORA40.13-201ENST00000516379 UBE2BP63146 152 aa-3.82□□□□□ -3.02
SNORA40.13-201ENST00000516379 AGPAT4-IT1Q9H0P7 198 aa-3.82□□□□□ -3.02
SNORA40.13-201ENST00000516379 UBR2Q8IWV8 1755 aa-3.82□□□□□ -3.02
SNORA40.13-201ENST00000516379 ADGRB1O14514 1584 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 WRNQ14191 1432 aaPredicted RBP eCLIP-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 IVLP07476 585 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 RRN3P1Q2M238 152 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 AKIRIN2Q53H80 203 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 TEX37Q96LM6 180 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 EFCAB11Q9BUY7 163 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 CCDC90BQ9GZT6 254 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 MAP1LC3AQ9H492 121 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 BZW2Q9Y6E2 419 aaKnown RBP-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 DNAH8Q96JB1 4490 aa-3.83□□□□□ -3.02
SNORA40.13-201ENST00000516379 REV3LO60673 3130 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 TRIOO75962 3097 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 KIF1BO60333 1816 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 TMEM256-PLSCR3K7ERE1 68 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 M0R2P5 195 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 LYPLA2O95372 231 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 OR5G3P0C626 314 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 SYT1P21579 422 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 KDELR2P33947 212 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 CAPZBP47756 277 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 DYNLT3P51808 116 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 TMEM229BQ8NBD8 167 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 OR4B1Q8NGF8 309 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 OR5A2Q8NGI9 324 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 CACYBPQ9HB71 228 aaKnown RBP-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 TRANK1O15050 2925 aa-3.84□□□□□ -3.02
SNORA40.13-201ENST00000516379 C3orf85A0A1B0GTC6 90 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 SMIM17P0DL12 118 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 IL7P13232 177 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 SDC4P31431 198 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 BCL2L15Q5TBC7 163 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 ST13P4Q8IZP2 240 aaPredicted RBP-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 TMEM86BQ8N661 226 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 OR51D1Q8NGF3 324 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 KCTD7Q96MP8 289 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 CIB3Q96Q77 187 aaPredicted RBP-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 LRP6O75581 1613 aa-3.85□□□□□ -3.03
SNORA40.13-201ENST00000516379 SRCAPQ6ZRS2 3230 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 ARL5CA6NH57 179 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 HPGDSO60760 199 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 CCL2P13500 99 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 MYL12AP19105 171 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 TNNC1P63316 161 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 PIGYQ3MUY2 71 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 CLVS2Q5SYC1 327 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 Q6Q795 121 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 PPP1R2P1Q96PQ5 205 aa-3.86□□□□□ -3.03
SNORA40.13-201ENST00000516379 FGD6Q6ZV73 1430 aa-3.87□□□□□ -3.03
SNORA40.13-201ENST00000516379 KDM5AP29375 1690 aaKnown RBP-3.87□□□□□ -3.03
SNORA40.13-201ENST00000516379 RHOHQ15669 191 aa-3.87□□□□□ -3.03
SNORA40.13-201ENST00000516379 C19orf12Q9NSK7 152 aa-3.87□□□□□ -3.03
SNORA40.13-201ENST00000516379 TVP23BQ9NYZ1 205 aa-3.87□□□□□ -3.03
SNORA40.13-201ENST00000516379 ASB4Q9Y574 426 aa-3.87□□□□□ -3.03
SNORA40.13-201ENST00000516379 KPNA3O00505 521 aaPredicted RBP-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 GGCTO75223 188 aaKnown RBP-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 BCL2P10415 239 aa-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 PIGPP57054 158 aa-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 FADDQ13158 208 aa-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 IMPG1Q17R60 797 aa-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 CCDC124Q96CT7 223 aaKnown RBP-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 OR51I1Q9H343 314 aa-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 PKIGQ9Y2B9 76 aa-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 PHIPQ8WWQ0 1821 aa-3.88□□□□□ -3.03
SNORA40.13-201ENST00000516379 FAM25EA8MYX2 175 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 TAX1BP3O14907 124 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 NPFFO15130 113 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 RER1O15258 196 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 CST7O76096 145 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 ITGB3BPQ13352 177 aaPredicted RBP-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 LYRM7Q5U5X0 104 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 SLC48A1Q6P1K1 146 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 SLC35B4Q969S0 331 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 OR52A5Q9H2C5 316 aa-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 TROQ12816 1431 aaPredicted RBP-3.89□□□□□ -3.03
SNORA40.13-201ENST00000516379 SMG1Q96Q15 3661 aaKnown RBP-3.9□□□□□ -3.03
SNORA40.13-201ENST00000516379 COL4A6Q14031 1691 aa-3.9□□□□□ -3.03
SNORA40.13-201ENST00000516379 TRBV10-1A0A0K0K1A3 114 aa-3.9□□□□□ -3.03
SNORA40.13-201ENST00000516379 RD3LP0DJH9 198 aa-3.9□□□□□ -3.03
SNORA40.13-201ENST00000516379 FAM151BQ6UXP7 276 aa-3.9□□□□□ -3.03
SNORA40.13-201ENST00000516379 OR8J3Q8NGG0 315 aa-3.9□□□□□ -3.03
SNORA40.13-201ENST00000516379 TRIM4Q9C037 500 aa-3.9□□□□□ -3.03
SNORA40.13-201ENST00000516379 ERCC6L2Q5T890 1561 aa-3.9□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms