RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 HAUS2Q9NVX0 235 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 AATFQ9NY61 560 aaKnown RBP eCLIP-1.26□□□□□ -2.612e-10■■■□□ 17.1
SCARNA17-201ENST00000516183 BET1LQ9NYM9 111 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 EHD3Q9NZN3 535 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 CNIH4Q9P003 139 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 MED11Q9P086 117 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 MRPL36Q9P0J6 103 aaKnown RBP-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 TOMM7Q9P0U1 55 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 C6orf48Q9UBA6 75 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 SAE1Q9UBE0 346 aaPredicted RBP-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 DNAJC5BQ9UF47 199 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 RCAN3Q9UKA8 241 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 MGAT4AQ9UM21 535 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 NOP58Q9Y2X3 529 aaKnown RBP-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 GOLT1BQ9Y3E0 138 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 CCNB3Q8WWL7 1395 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 PIK3C2GO75747 1445 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 CCDC141Q6ZP82 1450 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 ABCA10Q8WWZ4 1543 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 CFAP74Q9C0B2 1584 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 PPLO60437 1756 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 ARFGEF2Q9Y6D5 1785 aa-1.26□□□□□ -2.61
SCARNA17-201ENST00000516183 TRAV9-1A0A075B6T8 112 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TRAV38-1A0A0B4J264 116 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 B5MCH6 92 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 H0Y3Z8 333 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 M0QYV0 167 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CXCR6O00574 342 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 COPEO14579 308 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 LSM1O15116 133 aaKnown RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 ARPC3O15145 178 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 RGS16O15492 202 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 ENSAO43768 121 aaKnown RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 NUDT21O43809 227 aaKnown RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SNNO75324 88 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TTRP02766 147 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 RBP1P09455 135 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SEC11BP0C7V7 166 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SMIM6P0DI80 62 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SAA1P0DJI8 122 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SAA2P0DJI9 122 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 IL7P13232 177 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 MYL6BP14649 208 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 COX7CP15954 63 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 HLA-DPA1P20036 260 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SERPINA2P20848 420 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CDK2P24941 298 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 PSMA3P25788 255 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SPRP35270 261 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 ACTR1BP42025 376 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 PSMB3P49720 205 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 RAB9AP51151 201 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SUMO3P55854 103 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 YBEYP58557 167 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TAS2R19P59542 299 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 RAB5BP61020 215 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 ARF3P61204 181 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 RAP1BP61224 184 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 HERVK_113P63121 156 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 MRPS34P82930 218 aaKnown RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 ARF1P84077 181 aaKnown RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 ARF5P84085 180 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SF3A3Q12874 501 aaKnown RBP eCLIP-1.27□□□□□ -2.611e-323■■■■■ 34.4
SCARNA17-201ENST00000516183 UBE2V1Q13404 147 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CRYMQ14894 314 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 PTGISQ16647 500 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 GUK1Q16774 197 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CCDC153Q494R4 210 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 BRMS1LQ5PSV4 323 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 PIP5KL1Q5T9C9 394 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 FAM27BQ5VT28 67 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SAMD13Q5VXD3 122 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CST9Q5W186 159 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 LAMTOR1Q6IAA8 161 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TWF2Q6IBS0 349 aaKnown RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 FAM180BQ6P0A1 224 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TMEM179Q6ZVK1 233 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 FRA10AC1Q70Z53 315 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 LINC00305Q7Z4B0 112 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CCDC91Q7Z6B0 441 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 THAP5Q7Z6K1 395 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 ANKRD46Q86W74 232 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CBR4Q8N4T8 237 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 FAM24BQ8N5W8 94 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TTC29Q8NA56 475 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 ZNF738Q8NE65 137 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 OR2G3Q8NGZ4 309 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TMEM254Q8TBM7 123 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CXorf40AQ8TE69 158 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 DTD1Q8TEA8 209 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 DCAKDQ8WVC6 231 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TWIST2Q8WVJ9 160 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 AP3S1Q92572 193 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 GHSRQ92847 366 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 CHMP4CQ96CF2 233 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 TMA16Q96EY4 203 aaKnown RBP-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 DCUN1D1Q96GG9 259 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 SNF8Q96H20 258 aa-1.27□□□□□ -2.61
SCARNA17-201ENST00000516183 LINC00470Q9BZP3 86 aa-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms