RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CENPWQ5EE01 88 aa15.29■□□□□ 0.04
LSM6-207ENST00000515311 PRR9Q5T870 116 aa15.29■□□□□ 0.04
LSM6-207ENST00000515311 TMEM183AQ8IXX5 376 aa15.29■□□□□ 0.04
LSM6-207ENST00000515311 SMIM12Q96EX1 92 aa15.29■□□□□ 0.04
LSM6-207ENST00000515311 TP53TG1Q9Y2A0 90 aa15.29■□□□□ 0.04
LSM6-207ENST00000515311 J3KRW8 73 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 RNASE4P34096 147 aaKnown RBP15.28■□□□□ 0.04
LSM6-207ENST00000515311 GNG4P50150 75 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 DEFB135Q30KP9 77 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 SMUG1Q53HV7 270 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 UQCC3Q6UW78 93 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 BAGE2Q86Y30 109 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 RNF183Q96D59 192 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 C8orf49Q96NF6 230 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 RCHY1Q96PM5 261 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 TM2D3Q9BRN9 247 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 MLST8Q9BVC4 326 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 NBEAL2Q6ZNJ1 2754 aa15.28■□□□□ 0.04
LSM6-207ENST00000515311 TRBV20OR9-2A0A075B6H5 130 aa15.27■□□□□ 0.04
LSM6-207ENST00000515311 C9JCJ5 164 aa15.27■□□□□ 0.04
LSM6-207ENST00000515311 CEBPGP53567 150 aa15.27■□□□□ 0.04
LSM6-207ENST00000515311 BTN1A1Q13410 526 aa15.27■□□□□ 0.04
LSM6-207ENST00000515311 COMMD7Q86VX2 200 aa15.27■□□□□ 0.04
LSM6-207ENST00000515311 TMEM256Q8N2U0 113 aa15.27■□□□□ 0.04
LSM6-207ENST00000515311 EIF4E3Q8N5X7 224 aaKnown RBP15.27■□□□□ 0.04
LSM6-207ENST00000515311 GOLT1BQ9Y3E0 138 aa15.27■□□□□ 0.04
LSM6-207ENST00000515311 TRAV12-3A0A0B4J271 114 aa15.26■□□□□ 0.03
LSM6-207ENST00000515311 ZNF674Q2M3X9 581 aa15.26■□□□□ 0.03
LSM6-207ENST00000515311 Q6AWC8 147 aa15.26■□□□□ 0.03
LSM6-207ENST00000515311 ZNF705AQ6ZN79 300 aaPredicted RBP15.26■□□□□ 0.03
LSM6-207ENST00000515311 SMIM7Q9BQ49 75 aa15.26■□□□□ 0.03
LSM6-207ENST00000515311 SPRY2O43597 315 aa15.25■□□□□ 0.03
LSM6-207ENST00000515311 ZNF324O75467 553 aaPredicted RBP15.25■□□□□ 0.03
LSM6-207ENST00000515311 GCGP01275 180 aa15.25■□□□□ 0.03
LSM6-207ENST00000515311 RBMY1A1P0DJD3 496 aaKnown RBP15.25■□□□□ 0.03
LSM6-207ENST00000515311 RBMY1CP0DJD4 496 aa15.25■□□□□ 0.03
LSM6-207ENST00000515311 RBMY1FQ15415 496 aaKnown RBP15.25■□□□□ 0.03
LSM6-207ENST00000515311 FAM74A3Q4VXF1 159 aa15.25■□□□□ 0.03
LSM6-207ENST00000515311 C1orf158Q8N1D5 194 aa15.25■□□□□ 0.03
LSM6-207ENST00000515311 ZC2HC1AQ96GY0 325 aa15.25■□□□□ 0.03
LSM6-207ENST00000515311 SPATA25Q9BR10 227 aa15.25■□□□□ 0.03
LSM6-207ENST00000515311 NIPSNAP3BQ9BS92 247 aa15.25■□□□□ 0.03
LSM6-207ENST00000515311 ZNF727A8MUV8 499 aa15.24■□□□□ 0.03
LSM6-207ENST00000515311 NHLRC2Q8NBF2 726 aa15.24■□□□□ 0.03
LSM6-207ENST00000515311 TRAV21A0A0B4J279 112 aa15.23■□□□□ 0.03
LSM6-207ENST00000515311 H7BYZ3 331 aa15.23■□□□□ 0.03
LSM6-207ENST00000515311 IGLV2-8P01709 118 aa15.23■□□□□ 0.03
LSM6-207ENST00000515311 PFN1P07737 140 aaKnown RBP15.23■□□□□ 0.03
LSM6-207ENST00000515311 ZNF80P51504 273 aaPredicted RBP15.23■□□□□ 0.03
LSM6-207ENST00000515311 SOHLH1Q5JUK2 328 aa15.23■□□□□ 0.03
LSM6-207ENST00000515311 OVOL2Q9BRP0 275 aa15.23■□□□□ 0.03
LSM6-207ENST00000515311 TMEM208Q9BTX3 173 aa15.23■□□□□ 0.03
LSM6-207ENST00000515311 SFTA3P0C7M3 94 aa15.22■□□□□ 0.03
LSM6-207ENST00000515311 NHLRC4P0CG21 123 aaPredicted RBP15.22■□□□□ 0.03
LSM6-207ENST00000515311 FAM162BQ5T6X4 162 aa15.22■□□□□ 0.03
LSM6-207ENST00000515311 PYGO2Q9BRQ0 406 aa15.22■□□□□ 0.03
LSM6-207ENST00000515311 LY96Q9Y6Y9 160 aa15.22■□□□□ 0.03
LSM6-207ENST00000515311 OR11H2Q8NH07 326 aa15.21■□□□□ 0.03
LSM6-207ENST00000515311 LINC01587Q99440 93 aa15.21■□□□□ 0.03
LSM6-207ENST00000515311 NEU1Q99519 415 aa15.21■□□□□ 0.03
LSM6-207ENST00000515311 LINC00467Q9BRT7 94 aa15.21■□□□□ 0.03
LSM6-207ENST00000515311 ZMAT4Q9H898 229 aa15.21■□□□□ 0.03
LSM6-207ENST00000515311 BIN3Q9NQY0 253 aa15.21■□□□□ 0.03
LSM6-207ENST00000515311 PRKDCP78527 4128 aaKnown RBP15.2■□□□□ 0.02
LSM6-207ENST00000515311 IGHV3OR16-12A0A075B7B8 117 aa15.2■□□□□ 0.02
LSM6-207ENST00000515311 PGPEP1LA6NFU8 196 aa15.2■□□□□ 0.02
LSM6-207ENST00000515311 FABP5P3A8MUU1 101 aa15.2■□□□□ 0.02
LSM6-207ENST00000515311 CRIP1P50238 77 aa15.2■□□□□ 0.02
LSM6-207ENST00000515311 Q6ZQT7 251 aa15.2■□□□□ 0.02
LSM6-207ENST00000515311 RETNQ9HD89 108 aa15.2■□□□□ 0.02
LSM6-207ENST00000515311 X6R8D5 127 aa15.2■□□□□ 0.02
LSM6-207ENST00000515311 SMIM9A6NGZ8 99 aa15.19■□□□□ 0.02
LSM6-207ENST00000515311 OCC1Q8TAD7 63 aa15.19■□□□□ 0.02
LSM6-207ENST00000515311 COL7A1Q02388 2944 aa15.19■□□□□ 0.02
LSM6-207ENST00000515311 TENM3Q9P273 2699 aa15.18■□□□□ 0.02
LSM6-207ENST00000515311 SH2D1AO60880 128 aa15.18■□□□□ 0.02
LSM6-207ENST00000515311 MGST1P10620 155 aaKnown RBP15.18■□□□□ 0.02
LSM6-207ENST00000515311 TMEM241Q24JQ0 296 aa15.18■□□□□ 0.02
LSM6-207ENST00000515311 TDRG1Q3Y452 100 aa15.18■□□□□ 0.02
LSM6-207ENST00000515311 IGHV1OR15-1A0A075B7D0 117 aa15.17■□□□□ 0.02
LSM6-207ENST00000515311 TMEM218A2RU14 115 aa15.17■□□□□ 0.02
LSM6-207ENST00000515311 MIFP14174 115 aa15.17■□□□□ 0.02
LSM6-207ENST00000515311 FAM159AQ6UWV7 190 aa15.17■□□□□ 0.02
LSM6-207ENST00000515311 LINC01551Q86U37 167 aa15.17■□□□□ 0.02
LSM6-207ENST00000515311 KRTAP3-3Q9BYR6 98 aa15.17■□□□□ 0.02
LSM6-207ENST00000515311 KRTAP3-2Q9BYR7 98 aa15.17■□□□□ 0.02
LSM6-207ENST00000515311 NAT8Q9UHE5 227 aa15.17■□□□□ 0.02
LSM6-207ENST00000515311 K7EN84 100 aa15.16■□□□□ 0.02
LSM6-207ENST00000515311 RRN3P1Q2M238 152 aa15.16■□□□□ 0.02
LSM6-207ENST00000515311 PRR27Q6MZM9 219 aa15.16■□□□□ 0.02
LSM6-207ENST00000515311 KCNS1Q96KK3 526 aa15.16■□□□□ 0.02
LSM6-207ENST00000515311 C11orf21Q9P2W6 132 aa15.16■□□□□ 0.02
LSM6-207ENST00000515311 ANXA2RQ3ZCQ2 193 aa15.15■□□□□ 0.02
LSM6-207ENST00000515311 MUC21Q5SSG8 566 aa15.15■□□□□ 0.02
LSM6-207ENST00000515311 NAGKQ9UJ70 344 aa15.15■□□□□ 0.02
LSM6-207ENST00000515311 C19orf71A6NCJ1 209 aa15.14■□□□□ 0.01
LSM6-207ENST00000515311 ZNF705GA8MUZ8 300 aaPredicted RBP15.14■□□□□ 0.01
LSM6-207ENST00000515311 NDUFA5Q16718 116 aa15.14■□□□□ 0.01
LSM6-207ENST00000515311 ZNF493Q6ZR52 646 aa15.14■□□□□ 0.01
LSM6-207ENST00000515311 Q8NAQ8 132 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms