RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 BLNKQ8WV28 456 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 LY6LH3BQJ8 138 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 ZFP36P26651 326 aaKnown RBP5.72□□□□□ -1.49
CLIP1-205ENST00000514271 SLC35B1P78383 322 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 TIGITQ495A1 244 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 DUX4L9Q6RFH8 374 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-205ENST00000514271 KIR2DL5BQ8NHK3 375 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 ZC2HC1AQ96GY0 325 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 I3L2K1 104 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 HSD52Q0P140 79 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 FLYWCH2Q96CP2 140 aaKnown RBP5.72□□□□□ -1.49
CLIP1-205ENST00000514271 PPDPFQ9H3Y8 114 aa5.72□□□□□ -1.49
CLIP1-205ENST00000514271 IGHV4-4A0A075B6R2 117 aa5.71□□□□□ -1.49
CLIP1-205ENST00000514271 ODF3BA8MYP8 253 aa5.71□□□□□ -1.49
CLIP1-205ENST00000514271 IGHV1-8P0DP01 117 aa5.71□□□□□ -1.49
CLIP1-205ENST00000514271 FAM201AQ5SY85 155 aa5.71□□□□□ -1.49
CLIP1-205ENST00000514271 TMEM200BQ69YZ2 307 aa5.71□□□□□ -1.49
CLIP1-205ENST00000514271 CIARTQ8N365 385 aaPredicted RBP5.71□□□□□ -1.49
CLIP1-205ENST00000514271 TPRX1Q8N7U7 411 aa5.71□□□□□ -1.49
CLIP1-205ENST00000514271 BORCS7Q96B45 105 aa5.71□□□□□ -1.49
CLIP1-205ENST00000514271 SIGMAR1Q99720 223 aa5.71□□□□□ -1.49
CLIP1-205ENST00000514271 IGKV2D-26A0A0A0MRZ7 120 aa5.71□□□□□ -1.5
CLIP1-205ENST00000514271 IGHV3-43A0A0B4J1X8 118 aa5.71□□□□□ -1.5
CLIP1-205ENST00000514271 IGHV3-43DP0DP04 118 aa5.71□□□□□ -1.5
CLIP1-205ENST00000514271 OR2T6Q8NHC8 308 aa5.71□□□□□ -1.5
CLIP1-205ENST00000514271 TCL1AP56279 114 aa5.71□□□□□ -1.5
CLIP1-205ENST00000514271 TAS2R45P59539 299 aa5.71□□□□□ -1.5
CLIP1-205ENST00000514271 VMO1Q7Z5L0 202 aa5.71□□□□□ -1.5
CLIP1-205ENST00000514271 ZNRF1Q8ND25 227 aa5.71□□□□□ -1.5
CLIP1-205ENST00000514271 PRRC2CQ9Y520 2896 aaKnown RBP5.7□□□□□ -1.5
CLIP1-205ENST00000514271 PDZD2O15018 2839 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 PGPA6NDG6 321 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 NPFFO15130 113 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 LEPROTL1O95214 131 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 GNG5P63218 68 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 LYPD1Q8N2G4 141 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 OR4X2Q8NGF9 303 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 VSTM2AQ8TAG5 236 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 AJUBAQ96IF1 538 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 CYSRT1A8MQ03 144 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 H3BRN7 92 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 IGHV3-7P01780 117 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 ORM1P02763 201 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 C11orf44Q8N8P7 122 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 ATP6V0E2Q8NHE4 81 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 OTORQ9NRC9 128 aa5.7□□□□□ -1.5
CLIP1-205ENST00000514271 A0A1W2PPI3 338 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 BATFQ16520 125 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 MORN3Q6PF18 240 aaPredicted RBP5.69□□□□□ -1.5
CLIP1-205ENST00000514271 RNF5Q99942 180 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 M0R1X1 148 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 HILS1P60008 231 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 PSMG4Q5JS54 123 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 OR10AG1Q8NH19 301 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 S1PR3Q99500 378 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 PAXXQ9BUH6 204 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 HTR1DP28221 377 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 GAGE5Q13069 117 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 GAGE6Q13070 117 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 EDDM3AQ14507 147 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 TAL2Q16559 108 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 LINC01620Q4KN68 170 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 TMEM191AQ9H0A3 160 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 DPM3Q9P2X0 92 aa5.69□□□□□ -1.5
CLIP1-205ENST00000514271 APCP25054 2843 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 TRBV19A0A075B6N1 114 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 A0A0G2JLM5 398 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 FAM104BQ5XKR9 115 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 Q6AWC8 147 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 Q6YL49 198 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 ZNF331Q9NQX6 463 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-205ENST00000514271 HSPB8Q9UJY1 196 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 ZNF580Q9UK33 172 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 NBPF19A0A087WUL8 3843 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 HRNRQ86YZ3 2850 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-205ENST00000514271 A8MWL6 223 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 ARMS2P0C7Q2 107 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 UBE2D3P61077 147 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 UBE2D2P62837 147 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 TMEM158Q8WZ71 300 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 AMELXQ99217 191 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 WASHC3Q9Y3C0 194 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 IGHV3-64DA0A0J9YX35 117 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 EIF4EBP3O60516 100 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-205ENST00000514271 HSBP1O75506 76 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 NDUFA7O95182 113 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 IGLV1-47P01700 117 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 RNASE1P07998 156 aaKnown RBP5.68□□□□□ -1.5
CLIP1-205ENST00000514271 LTC4SQ16873 150 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 PDPNQ86YL7 162 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 NRACQ8N912 160 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 RPEQ96AT9 228 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 ZNRD1Q9P1U0 126 aa5.68□□□□□ -1.5
CLIP1-205ENST00000514271 TRAV40A0A0B4J280 105 aa5.67□□□□□ -1.5
CLIP1-205ENST00000514271 SPINK4O60575 86 aa5.67□□□□□ -1.5
CLIP1-205ENST00000514271 FXYD2P54710 66 aa5.67□□□□□ -1.5
CLIP1-205ENST00000514271 IGKV1-17P01599 117 aa5.67□□□□□ -1.5
CLIP1-205ENST00000514271 UBE2D1P51668 147 aa5.67□□□□□ -1.5
CLIP1-205ENST00000514271 ZNF138P52744 262 aa5.67□□□□□ -1.5
CLIP1-205ENST00000514271 C10orf113Q5VZT2 155 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms