RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TCTEX1D4Q5JR98 221 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 C4orf3Q8WVX3 66 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 BORCS7Q96B45 105 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 NIT2Q9NQR4 276 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 IGKV3-7A0A075B6H7 116 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 PAFAH1B2P68402 229 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 DNLZQ5SXM8 178 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 ORM1P02763 201 aa11.27□□□□□ -0.61
VCAN-211ENST00000513984 ZNF705DP0CH99 300 aaPredicted RBP11.27□□□□□ -0.61
VCAN-211ENST00000513984 ZNF705BP0CI00 300 aaPredicted RBP11.27□□□□□ -0.61
VCAN-211ENST00000513984 ID1P41134 155 aa11.27□□□□□ -0.61
VCAN-211ENST00000513984 FER1L6-AS1Q8NA97 138 aa11.27□□□□□ -0.61
VCAN-211ENST00000513984 OR8A1Q8NGG7 326 aa11.27□□□□□ -0.61
VCAN-211ENST00000513984 RCHY1Q96PM5 261 aa11.27□□□□□ -0.61
VCAN-211ENST00000513984 TPPP3Q9BW30 176 aa11.27□□□□□ -0.61
VCAN-211ENST00000513984 LOC102724200A0A096LPH7 203 aaPredicted RBP11.26□□□□□ -0.61
VCAN-211ENST00000513984 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
VCAN-211ENST00000513984 C2orf70A6NJV1 201 aa11.26□□□□□ -0.61
VCAN-211ENST00000513984 SRD5A1P18405 259 aa11.26□□□□□ -0.61
VCAN-211ENST00000513984 JOSD1Q15040 202 aaPredicted RBP11.26□□□□□ -0.61
VCAN-211ENST00000513984 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
VCAN-211ENST00000513984 FAM19A4Q96LR4 140 aa11.26□□□□□ -0.61
VCAN-211ENST00000513984 SELENOKQ9Y6D0 94 aa11.26□□□□□ -0.61
VCAN-211ENST00000513984 LINC01619G3V211 115 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 RNASE1P07998 156 aaKnown RBP11.25□□□□□ -0.61
VCAN-211ENST00000513984 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 WFDC12Q8WWY7 111 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 KCNS1Q96KK3 526 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 MS4A6AQ9H2W1 248 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 IGKV3D-20A0A0C4DH25 116 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 DEFB1P60022 68 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 PRR31Q5SQ13 230 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 PRR9Q5T870 116 aa11.25□□□□□ -0.61
VCAN-211ENST00000513984 SLURP1P55000 103 aa11.24□□□□□ -0.61
VCAN-211ENST00000513984 IQCJQ1A5X6 159 aa11.24□□□□□ -0.61
VCAN-211ENST00000513984 CDPF1Q6NVV7 123 aa11.24□□□□□ -0.61
VCAN-211ENST00000513984 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
VCAN-211ENST00000513984 HECTD1Q9ULT8 2610 aa11.24□□□□□ -0.61
VCAN-211ENST00000513984 F6UB75 175 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 K7EQG2 157 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 OR11H1Q8NG94 326 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 M0QZ24 198 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 ADAMTSL5Q6ZMM2 481 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 WFDC3Q8IUB2 231 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 KLHL30-AS1Q8NEE0 82 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 SAMD10Q9BYL1 202 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
VCAN-211ENST00000513984 PCP4L1A6NKN8 68 aa11.22□□□□□ -0.61
VCAN-211ENST00000513984 GPX1P07203 203 aa11.22□□□□□ -0.61
VCAN-211ENST00000513984 KHDC1LQ5JSQ8 128 aa11.22□□□□□ -0.61
VCAN-211ENST00000513984 OR1N2Q8NGR9 330 aa11.22□□□□□ -0.61
VCAN-211ENST00000513984 DPF1Q92782 380 aa11.22□□□□□ -0.61
VCAN-211ENST00000513984 ZNF324O75467 553 aaPredicted RBP11.21□□□□□ -0.61
VCAN-211ENST00000513984 HILS1P60008 231 aa11.21□□□□□ -0.61
VCAN-211ENST00000513984 SNRPD3P62318 126 aaKnown RBP11.21□□□□□ -0.61
VCAN-211ENST00000513984 S100A12P80511 92 aa11.21□□□□□ -0.61
VCAN-211ENST00000513984 ZNF418Q8TF45 676 aaPredicted RBP11.21□□□□□ -0.61
VCAN-211ENST00000513984 PEMTQ9UBM1 199 aa11.21□□□□□ -0.61
VCAN-211ENST00000513984 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.62
VCAN-211ENST00000513984 NTF3P20783 257 aa11.21□□□□□ -0.62
VCAN-211ENST00000513984 Q6ZQT7 251 aa11.21□□□□□ -0.62
VCAN-211ENST00000513984 Q6ZWC4 215 aa11.21□□□□□ -0.62
VCAN-211ENST00000513984 MTORP42345 2549 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 ZNF688P0C7X2 276 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 TFPI2P48307 235 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 AMTP48728 403 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 FAM104BQ5XKR9 115 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 OR9G4Q8NGQ1 327 aa11.2□□□□□ -0.62
VCAN-211ENST00000513984 TWIST1Q15672 202 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 PSMG4Q5JS54 123 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 LINC01006Q8NI28 216 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 URB1-AS1Q96HZ7 61 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 ODF3Q96PU9 254 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 SMR3AQ99954 134 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 GSN-AS1Q9NRJ2 163 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 AGRNO00468 2067 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 KLLNB2CW77 178 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 SNAI2O43623 268 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 OR5AL1P0C617 328 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 PMCHP20382 165 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
VCAN-211ENST00000513984 DUX3Q96PT4 197 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 U3KQK5 164 aa11.19□□□□□ -0.62
VCAN-211ENST00000513984 CUBNO60494 3623 aa11.18□□□□□ -0.62
VCAN-211ENST00000513984 HIVEP2P31629 2446 aa11.18□□□□□ -0.62
VCAN-211ENST00000513984 A0A0J9YX75 114 aa11.18□□□□□ -0.62
VCAN-211ENST00000513984 J3KRW8 73 aa11.18□□□□□ -0.62
VCAN-211ENST00000513984 SSTP61278 116 aa11.18□□□□□ -0.62
VCAN-211ENST00000513984 NIT1Q86X76 327 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms