RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ODF3Q96PU9 254 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 ATG101Q9BSB4 218 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 TMEM208Q9BTX3 173 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 MRPL18Q9H0U6 180 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 GOLT1BQ9Y3E0 138 aa7.09□□□□□ -1.27
TOPBP1-209ENST00000513818 TRAV1-1A0A0B4J248 108 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 C7orf71A4D174 169 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 RBAKDNA6NC62 111 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 ZNF705GA8MUZ8 300 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 C11orf94C9JXX5 98 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 IGLV2-11P01706 119 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 AMBPP02760 352 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 HTN1P15515 57 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 RNASE4P34096 147 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 TEX261Q6UWH6 196 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 ZNF705AQ6ZN79 300 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 PRNTQ86SH4 94 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 Q86TA4 180 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 Q8NAQ8 132 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 LINC00477Q96M19 166 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 C8orf49Q96NF6 230 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 PSG8Q9UQ74 426 aa7.08□□□□□ -1.28
TOPBP1-209ENST00000513818 A0A087WWL8 130 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 KLLNB2CW77 178 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 GPX1P07203 203 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 CRISP2P16562 243 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 TSPOP30536 169 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 AKR1C3P42330 323 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 EMP1P54849 157 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 FLI1Q01543 452 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 ZNF680Q8NEM1 530 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 LINC01587Q99440 93 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 EDA2RQ9HAV5 297 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 MANBALQ9NQG1 85 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 ARL2-SNX15V9GYD0 113 aa7.07□□□□□ -1.28
TOPBP1-209ENST00000513818 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 DNAH1Q9P2D7 4330 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 LOC102723971A0A1B0GUV8 181 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 K7EQM0 130 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 BCL2P10415 239 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 AZU1P20160 251 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 PPT1P50897 306 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 BLOC1S1P78537 153 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 MUC21Q5SSG8 566 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 PET117Q6UWS5 81 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 ZNF767PQ75MW2 155 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 TMEM75Q8N9X5 138 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 NHLRC2Q8NBF2 726 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 DERL1Q9BUN8 251 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 TREM1Q9NP99 234 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 NAGKQ9UJ70 344 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 CELA1Q9UNI1 258 aa7.06□□□□□ -1.28
TOPBP1-209ENST00000513818 SERTM2A0A1B0GWG4 89 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 IFNA1P01562 189 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 MIFP14174 115 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 ZNF80P51504 273 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 UBE2G1P62253 170 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 RRN3P1Q2M238 152 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 C2CD4CQ8TF44 421 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 HIST1H2BAQ96A08 127 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 NIPSNAP3BQ9BS92 247 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 NDFIP1Q9BT67 221 aa7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 NKX6-2Q9C056 277 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-209ENST00000513818 H7BYZ3 331 aa7.04□□□□□ -1.28
TOPBP1-209ENST00000513818 NMBP08949 121 aa7.04□□□□□ -1.28
TOPBP1-209ENST00000513818 MEF2BQ02080 365 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-209ENST00000513818 ZFAND6Q6FIF0 208 aa7.04□□□□□ -1.28
TOPBP1-209ENST00000513818 DGAT2L7PQ6IED9 249 aa7.04□□□□□ -1.28
TOPBP1-209ENST00000513818 WWC2-AS2Q96NR7 200 aa7.04□□□□□ -1.28
TOPBP1-209ENST00000513818 C11orf68Q9H3H3 251 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-209ENST00000513818 TP53TG3Q9ULZ0 132 aa7.04□□□□□ -1.28
TOPBP1-209ENST00000513818 ZNF324O75467 553 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 GCGP01275 180 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 TAS2R60P59551 318 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 NANOS2P60321 138 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 IFITM2Q01629 132 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 TMEM183BQ1AE95 376 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 TMEM256Q8N2U0 113 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 LYPD6BQ8NI32 183 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 C11orf52Q96A22 123 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 ZC2HC1AQ96GY0 325 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 NEU1Q99519 415 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 C20orf144Q9BQM9 153 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 VAX2Q9UIW0 290 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 LENEPQ9Y5L5 61 aa7.03□□□□□ -1.28
TOPBP1-209ENST00000513818 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 IGHV1OR15-1A0A075B7D0 117 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 PLAC8L1A1L4L8 177 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 RAB19A4D1S5 217 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 RBFOX3A6NFN3 312 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 CBY3A6NI87 242 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 RPL35P42766 123 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 CEBPGP53567 150 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 SMUG1Q53HV7 270 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 CENPWQ5EE01 88 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 ZNF506Q5JVG8 444 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 Q6AWC8 147 aa7.02□□□□□ -1.29
TOPBP1-209ENST00000513818 WDR73Q6P4I2 378 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms