RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 LSM3P62310 102 aaKnown RBP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 RPS28P62857 69 aaKnown RBP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 NEDD8Q15843 81 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 SPINK9Q5DT21 86 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 Q6ZQY7 126 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 TEX29Q8N6K0 151 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 TCTEX1D1Q8N7M0 179 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 C5orf17Q8NAS9 161 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 TMEM35BQ8NCS4 154 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 OR5A2Q8NGI9 324 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 NAT14Q8WUY8 206 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 CCDC115Q96NT0 180 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 AP1S3Q96PC3 154 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 SMR3AQ99954 134 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 LIMD2Q9BT23 127 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 CBLN4Q9NTU7 201 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 TRAPPC2LQ9UL33 140 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 ANKRD31Q8N7Z5 1873 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 JMJD1CQ15652 2540 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 PBRM1Q86U86 1689 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 PTPRZ1P23471 2315 aaPredicted RBP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 DLC1Q96QB1 1528 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 FER1L6Q2WGJ9 1857 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 A0A1W2PPB8 328 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 A0A1W2PRS3 328 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 IFITM5A6NNB3 132 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 BBIP1A8MTZ0 92 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 KIR3DP1A8MWS1 328 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 TSTD3H0UI37 97 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 H0YJX3 145 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 NBEAP1P0C6P0 100 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 SLC25A4P12235 298 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 CRYGSP22914 178 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 S100GP29377 79 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 ETV6P41212 452 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 BLCAPP62952 87 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 ASB16-AS1Q495Z4 193 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 Q6ZS92 163 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 OR51A4Q8NGJ6 313 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 LPAR5Q9H1C0 372 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 FKBP11Q9NYL4 201 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 GINS2Q9Y248 185 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 NDUFAF1Q9Y375 327 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 HSPB11Q9Y547 144 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 CADP27708 2225 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 FAM135BQ49AJ0 1406 aa0.29□□□□□ -2.36
TRAPPC11-210ENST00000513600 TPRP12270 2363 aaKnown RBP0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 A0A0D9SG42 100 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 GNG14A0A1W2PPG7 69 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 UQCRQO14949 82 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 IGF2P01344 180 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 HBDP02042 147 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 GTF2A1P52655 376 aaPredicted RBP0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 FXYD6P3P58550 94 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 XAF1Q6GPH4 301 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 C10orf99Q6UWK7 81 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 C3orf62Q6ZUJ4 267 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 DEFB132Q7Z7B7 95 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 CCL19Q99731 98 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 SPANXA1Q9NS26 97 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 SPANXCQ9NY87 97 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 JPT1Q9UK76 154 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 DSPPQ9NZW4 1301 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 MED23Q9ULK4 1368 aa0.28□□□□□ -2.36
TRAPPC11-210ENST00000513600 FGD6Q6ZV73 1430 aa0.28□□□□□ -2.37
TRAPPC11-210ENST00000513600 KMT2DO14686 5537 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 ANK1P16157 1881 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 ATG2AQ2TAZ0 1938 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 LOC107984156A0A0G2JMH3 177 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 PNMA8CA0A1B0GUJ8 204 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 A0A1B0GX51 115 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 TMEM189A5PLL7 270 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 NUPR2A6NF83 97 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 J3KT08 172 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 M0QZK8 103 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 EDF1O60869 148 aaKnown RBP0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 CAV3P56539 151 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 SNRPD3P62318 126 aaKnown RBP0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 PSPHP78330 225 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 CSAG1Q6PB30 78 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 Q86TA4 180 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 TAC4Q86UU9 113 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 ARL17AQ8IVW1 177 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 OR8J3Q8NGG0 315 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 BRK1Q8WUW1 75 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 PLAC4Q8WY50 150 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 SMIM7Q9BQ49 75 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 MRPL35Q9NZE8 188 aaKnown RBP0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 GPR98Q8WXG9 6306 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 USP54Q70EL1 1684 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 KIAA1549LQ6ZVL6 1849 aa0.27□□□□□ -2.37
TRAPPC11-210ENST00000513600 MYH1P12882 1939 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 ASXL3Q9C0F0 2248 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 PIEZO1Q92508 2521 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 TRAV36DV7A0A075B6V5 113 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 BORCS7-ASMTA0A0B4J1R7 106 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 TMEM30CPA0ZSE6 113 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 DPM2O94777 84 aa0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 SLC25A5P05141 298 aaKnown RBP0.26□□□□□ -2.37
TRAPPC11-210ENST00000513600 SCTP09683 121 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms