RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SMIM6P0DI80 62 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 CRISP2P16562 243 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 CTRLP40313 264 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 AKR1D1P51857 326 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 SYNJ2BPP57105 145 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 ERCC8Q13216 396 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 GDF5OSQ5U4N7 250 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 ZNF493Q6ZR52 646 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 ZNF738Q8NE65 137 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 OR8A1Q8NGG7 326 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 OR1N2Q8NGR9 330 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 OR10J6PQ8NGY7 276 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 Q8TAT8 98 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 PACRGQ96M98 296 aaPredicted RBP6.31□□□□□ -1.4
RNF4-220ENST00000513578 ODF3Q96PU9 254 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 CNFNQ9BYD5 112 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 NOTCH1P46531 2555 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 STAB1Q9NY15 2570 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
RNF4-220ENST00000513578 TLN2Q9Y4G6 2542 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 LCE2BO14633 110 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 S100A2P29034 98 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 FHL3Q13643 280 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 DNLZQ5SXM8 178 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 ZNF575Q86XF7 245 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 LINC01006Q8NI28 216 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 DPF1Q92782 380 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 BORCS7Q96B45 105 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 MS4A6AQ9H2W1 248 aa6.3□□□□□ -1.4
RNF4-220ENST00000513578 F2Z2F3 143 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 GZMBP10144 247 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 EDN2P20800 178 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 RAB4BP61018 213 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 RPL11P62913 178 aaKnown RBP6.29□□□□□ -1.4
RNF4-220ENST00000513578 PAFAH1B2P68402 229 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 SLAQ13239 276 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 GFI1BQ5VTD9 330 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 ADAMTSL5Q6ZMM2 481 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 ZFAND2AQ8N6M9 145 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 OR11H1Q8NG94 326 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 OR9G4Q8NGQ1 327 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 TMEM18Q96B42 140 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 SIGLEC8Q9NYZ4 499 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 TP53TG3Q9ULZ0 132 aa6.29□□□□□ -1.4
RNF4-220ENST00000513578 SVEP1Q4LDE5 3571 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 AKAP9Q99996 3911 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 TRAV25A0A0B4J276 109 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 TRAV21A0A0B4J279 112 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 IGKV3D-20A0A0C4DH25 116 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 AMBPP02760 352 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 CSN3P07498 182 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 ARMS2P0C7Q2 107 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 MED14OSP0DP75 135 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 CAMPP49913 170 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 SLURP1P55000 103 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 SNRPD3P62318 126 aaKnown RBP6.28□□□□□ -1.4
RNF4-220ENST00000513578 LYZL1Q6UWQ5 148 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 C18orf65Q6ZTR6 163 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 FER1L6-AS1Q8NA97 138 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 KLHL30-AS1Q8NEE0 82 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 ALKBH7Q9BT30 221 aaPredicted RBP6.28□□□□□ -1.4
RNF4-220ENST00000513578 SSBP4Q9BWG4 385 aaPredicted RBP6.28□□□□□ -1.4
RNF4-220ENST00000513578 TSSC4Q9Y5U2 329 aaPredicted RBP6.28□□□□□ -1.4
RNF4-220ENST00000513578 ACANP16112 2415 aa6.28□□□□□ -1.4
RNF4-220ENST00000513578 SONP18583 2426 aaKnown RBP6.28□□□□□ -1.4
RNF4-220ENST00000513578 ZNF469Q96JG9 3925 aaPredicted RBP6.28□□□□□ -1.4
RNF4-220ENST00000513578 IGHV4-4A0A075B6R2 117 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 LOC102724200A0A096LPH7 203 aaPredicted RBP6.27□□□□□ -1.41
RNF4-220ENST00000513578 A0A0J9YX75 114 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 A8MTW9 85 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 KLLNB2CW77 178 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 SNAI2O43623 268 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 DUSP14O95147 198 aaKnown RBP6.27□□□□□ -1.41
RNF4-220ENST00000513578 ORM1P02763 201 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 SRIP30626 198 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 PROK1P58294 105 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 LINC00310P59036 64 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 C18orf32Q8TCD1 76 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 C11orf21Q9P2W6 132 aa6.27□□□□□ -1.41
RNF4-220ENST00000513578 GRIFINA4D1Z8 144 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 GPX1P07203 203 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 OR5AL1P0C617 328 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 PRB4P10163 310 aaPredicted RBP6.26□□□□□ -1.41
RNF4-220ENST00000513578 CD28P10747 220 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 FABP4P15090 132 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 LEPP41159 167 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 CACNG7P62955 275 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 DEFB136Q30KP8 78 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 KIAA1644Q3SXP7 199 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 PRR9Q5T870 116 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 FOXI2Q6ZQN5 318 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 BAGE3Q86Y29 109 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 TMEM256Q8N2U0 113 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 OR10D4PQ8NGN7 298 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 DLX4Q92988 240 aaPredicted RBP6.26□□□□□ -1.41
RNF4-220ENST00000513578 RAX2Q96IS3 184 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 C12orf57Q99622 126 aa6.26□□□□□ -1.41
RNF4-220ENST00000513578 SMR3AQ99954 134 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms