RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 HBG1P69891 147 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 HBG2P69892 147 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 BAXQ07812 192 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 GUK1Q16774 197 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 STX12Q86Y82 276 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 ZFAND2AQ8N6M9 145 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 PFDN5Q99471 154 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 NPCDR1Q9BY65 106 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 TMEM14CQ9P0S9 112 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 PRO0255Q9UI72 69 aa6.5□□□□□ -1.37
TCOF1-212ENST00000513538 CRISP2P16562 243 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 FGF7P21781 194 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 RNASE4P34096 147 aaKnown RBP6.49□□□□□ -1.37
TCOF1-212ENST00000513538 GCSAMLQ5JQS6 135 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 IBA57Q5T440 356 aaKnown RBP6.49□□□□□ -1.37
TCOF1-212ENST00000513538 Q6ZSN1 163 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 NFE4Q86UQ8 179 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 OR5C1Q8NGR4 320 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
TCOF1-212ENST00000513538 FAM167A-AS1Q96KT0 104 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 VGLL1Q99990 258 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 BATF3Q9NR55 127 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 MSRB1Q9NZV6 116 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 LY96Q9Y6Y9 160 aa6.49□□□□□ -1.37
TCOF1-212ENST00000513538 TRBV19A0A075B6N1 114 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 IGKV2-40A0A087WW87 121 aaPredicted RBP6.48□□□□□ -1.37
TCOF1-212ENST00000513538 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 K7EQD1 137 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 IGKV2D-40P01614 121 aaPredicted RBP6.48□□□□□ -1.37
TCOF1-212ENST00000513538 PYYP10082 97 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 CYCSP99999 105 aaKnown RBP6.48□□□□□ -1.37
TCOF1-212ENST00000513538 MRPL23Q16540 153 aaKnown RBP6.48□□□□□ -1.37
TCOF1-212ENST00000513538 EXOC3-AS1Q8N2X6 119 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 PPP1R1CQ8WVI7 109 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 SLC25A2Q9BXI2 301 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 WDR61Q9GZS3 305 aaKnown RBP6.48□□□□□ -1.37
TCOF1-212ENST00000513538 SLC25A31Q9H0C2 315 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 FAM30AQ9NZY2 134 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 HHLA3Q9XRX5 114 aa6.48□□□□□ -1.37
TCOF1-212ENST00000513538 IGHV1OR15-1A0A075B7D0 117 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 MPC2O95563 127 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 SFTA3P0C7M3 94 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 HIST1H1EP10412 219 aaKnown RBP6.47□□□□□ -1.37
TCOF1-212ENST00000513538 PDE6HQ13956 83 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 LRRC37A5PQ49AS3 106 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 C9orf47Q6ZRZ4 202 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 NEGR1Q7Z3B1 354 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 THAP6Q8TBB0 222 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 ZNF479Q96JC4 524 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 LINC00477Q96M19 166 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 TMEM70Q9BUB7 260 aa6.47□□□□□ -1.37
TCOF1-212ENST00000513538 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 RGS13O14921 159 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 GPX1P07203 203 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 SRIP30626 198 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 DEFA1P59665 94 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 DEFA3P59666 94 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 MIR17HGQ75NE6 70 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 Q8TAT8 98 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 BLNKQ8WV28 456 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 MRPL32Q9BYC8 188 aaKnown RBP6.46□□□□□ -1.38
TCOF1-212ENST00000513538 ZNF492Q9P255 531 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 HSPB11Q9Y547 144 aa6.46□□□□□ -1.38
TCOF1-212ENST00000513538 TRAV9-2A0A087WT02 112 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 TRGV4A0A0C4DH28 118 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 LOC100131303A0A0U1RQF7 123 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 CRYGDP07320 174 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 NMBP08949 121 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 GYPEP15421 78 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 EVI2AP22794 236 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 MUC21Q5SSG8 566 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 FXYD5Q96DB9 178 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 PRELID1Q9Y255 219 aa6.45□□□□□ -1.38
TCOF1-212ENST00000513538 K7EP13 123 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 SSNA1O43805 119 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 NBEAP1P0C6P0 100 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 SLAQ13239 276 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 WFDC2Q14508 124 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 FAM122CQ6P4D5 195 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 IQCF2Q8IXL9 164 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 ATP5SQ99766 215 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 ARPC5LQ9BPX5 153 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 OR51M1Q9H341 326 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 WFDC1Q9HC57 220 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 TIMM9Q9Y5J7 89 aa6.44□□□□□ -1.38
TCOF1-212ENST00000513538 C17orf112F2Z3M2 114 aa6.43□□□□□ -1.38
TCOF1-212ENST00000513538 RPL12P30050 165 aaKnown RBP6.43□□□□□ -1.38
TCOF1-212ENST00000513538 TMEM78Q5T7P6 136 aa6.43□□□□□ -1.38
TCOF1-212ENST00000513538 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
TCOF1-212ENST00000513538 Q8N814 137 aa6.43□□□□□ -1.38
TCOF1-212ENST00000513538 OR10G4Q8NGN3 311 aa6.43□□□□□ -1.38
TCOF1-212ENST00000513538 NTN5Q8WTR8 489 aaPredicted RBP6.43□□□□□ -1.38
TCOF1-212ENST00000513538 KCNIP2Q9NS61 270 aa6.43□□□□□ -1.38
TCOF1-212ENST00000513538 MBD2Q9UBB5 411 aa6.43□□□□□ -1.38
TCOF1-212ENST00000513538 ALG5Q9Y673 324 aa6.43□□□□□ -1.38
TCOF1-212ENST00000513538 KRTAP29-1A8MX34 341 aaPredicted RBP6.42□□□□□ -1.38
TCOF1-212ENST00000513538 PET100P0DJ07 73 aa6.42□□□□□ -1.38
TCOF1-212ENST00000513538 ZNF138P52744 262 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms