RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 TCL1AP56279 114 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 FAM3BP58499 235 aaPredicted RBP6.09□□□□□ -1.43
HTT-209ENST00000512068 SRSF2Q01130 221 aaKnown RBP6.09□□□□□ -1.43
HTT-209ENST00000512068 FHL3Q13643 280 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 C9orf47Q6ZRZ4 202 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 OR2D3Q8NGH3 330 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 DCANP1Q8TF63 244 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 TSKUQ8WUA8 353 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 ZC2HC1AQ96GY0 325 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 C20orf173Q96LM9 149 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 ASCL2Q99929 193 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 LENEPQ9Y5L5 61 aa6.09□□□□□ -1.43
HTT-209ENST00000512068 IZUMO1RA6ND01 250 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 FABP5P3A8MUU1 101 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 S100A6P06703 90 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 LEPP41159 167 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 RAB4BP61018 213 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 Q6AWC8 147 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 HIST2H2BDQ6DRA6 164 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 WDR73Q6P4I2 378 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.08□□□□□ -1.44
HTT-209ENST00000512068 OR8A1Q8NGG7 326 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 SPAG8Q99932 426 aaPredicted RBP6.08□□□□□ -1.44
HTT-209ENST00000512068 GFRA4Q9GZZ7 299 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 AGPAT4-IT1Q9H0P7 198 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 SRD5A3Q9H8P0 318 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 F8P00451 2351 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 ZFHX3Q15911 3703 aa6.08□□□□□ -1.44
HTT-209ENST00000512068 WNK1Q9H4A3 2382 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 SMIM27A0A1W2PRY6 76 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 C19orf71A6NCJ1 209 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 FAM231BA6NCW3 169 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 SH2D1AO60880 128 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 CA1P00915 261 aaPredicted RBP6.07□□□□□ -1.44
HTT-209ENST00000512068 ORM1P02763 201 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 GPX1P07203 203 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 TSPOP30536 169 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 CMC4P56277 68 aaPredicted RBP6.07□□□□□ -1.44
HTT-209ENST00000512068 FRZBQ92765 325 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 YPEL4Q96NS1 127 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 TPPP3Q9BW30 176 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 SAV1Q9H4B6 383 aaPredicted RBP6.07□□□□□ -1.44
HTT-209ENST00000512068 SIGLEC8Q9NYZ4 499 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 TRAPPC1Q9Y5R8 145 aa6.07□□□□□ -1.44
HTT-209ENST00000512068 FLNBO75369 2602 aaKnown RBP6.07□□□□□ -1.44
HTT-209ENST00000512068 FN1P02751 2386 aaKnown RBP6.06□□□□□ -1.44
HTT-209ENST00000512068 TRAV21A0A0B4J279 112 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 TRBV7-9A0A0J9YWB2 115 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 HIGD1CA8MV81 97 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 J3KRW8 73 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 SPINK4O60575 86 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 MT-ND6P03923 174 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 TYMSP04818 313 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 S100A8P05109 93 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 ZNF705DP0CH99 300 aaPredicted RBP6.06□□□□□ -1.44
HTT-209ENST00000512068 ZNF705BP0CI00 300 aaPredicted RBP6.06□□□□□ -1.44
HTT-209ENST00000512068 DEFB114Q30KQ6 69 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 CD300EQ496F6 205 aaPredicted RBP6.06□□□□□ -1.44
HTT-209ENST00000512068 MRPL54Q6P161 138 aaKnown RBP6.06□□□□□ -1.44
HTT-209ENST00000512068 RASL11AQ6T310 242 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 FOXI2Q6ZQN5 318 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 COX8CQ7Z4L0 72 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 ATP5L2Q7Z4Y8 100 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 TMEM61Q8N0U2 210 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 ZFP82Q8N141 532 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 SYT8Q8NBV8 401 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 OR2K2Q8NGT1 345 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 NEU1Q99519 415 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 PYGO2Q9BRQ0 406 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 GPR61Q9BZJ8 451 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 OTOGQ6ZRI0 2925 aa6.06□□□□□ -1.44
HTT-209ENST00000512068 TMSB15BA0A087X1C1 80 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 A0A0J9YX75 114 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 SNURFLB1AK76 121 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 F6UB75 175 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 HLA-DQA1P01909 254 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 TRGC2P03986 189 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 DEFB131AP59861 70 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 HBBP68871 147 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 RIGQ13278 110 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 LINC00322Q6ZN03 302 aaPredicted RBP6.05□□□□□ -1.44
HTT-209ENST00000512068 NUP35Q8NFH5 326 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 PGLYRP4Q96LB8 373 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 ODF3Q96PU9 254 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 NAGKQ9UJ70 344 aa6.05□□□□□ -1.44
HTT-209ENST00000512068 A0A1B0GW15 77 aa6.04□□□□□ -1.44
HTT-209ENST00000512068 OR11H12B2RN74 326 aa6.04□□□□□ -1.44
HTT-209ENST00000512068 IGKV3-20P01619 116 aa6.04□□□□□ -1.44
HTT-209ENST00000512068 GZMBP10144 247 aa6.04□□□□□ -1.44
HTT-209ENST00000512068 S100A4P26447 101 aaKnown RBP6.04□□□□□ -1.44
HTT-209ENST00000512068 RNASE4P34096 147 aaKnown RBP6.04□□□□□ -1.44
HTT-209ENST00000512068 FABP9Q0Z7S8 132 aa6.04□□□□□ -1.44
HTT-209ENST00000512068 ADAMTSL5Q6ZMM2 481 aa6.04□□□□□ -1.44
HTT-209ENST00000512068 FER1L6-AS1Q8NA97 138 aa6.04□□□□□ -1.44
HTT-209ENST00000512068 SETXQ7Z333 2677 aaKnown RBP6.04□□□□□ -1.44
HTT-209ENST00000512068 NSD1Q96L73 2696 aaPredicted RBP6.04□□□□□ -1.44
HTT-209ENST00000512068 HIVEP1P15822 2718 aa6.04□□□□□ -1.44
HTT-209ENST00000512068 A0A1B0GUT8 65 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 CRISP2P16562 243 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms