RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 CXCL1P09341 107 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 CRISP2P16562 243 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 KRTAP10-3P60369 221 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 RPS20P60866 119 aaKnown RBP6.81□□□□□ -1.32
NR1I3-230ENST00000511944 ELOBQ15370 118 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 COX19Q49B96 90 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 FAM162BQ5T6X4 162 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 FOXI2Q6ZQN5 318 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 FAM19A4Q96LR4 140 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 ASCL2Q99929 193 aa6.81□□□□□ -1.32
NR1I3-230ENST00000511944 A0A0J9YX75 114 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 SMIM27A0A1W2PRY6 76 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 COLCA2A8K830 154 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 ZNF705FA8MVS1 300 aaPredicted RBP6.8□□□□□ -1.32
NR1I3-230ENST00000511944 GATCO43716 136 aaKnown RBP6.8□□□□□ -1.32
NR1I3-230ENST00000511944 IGLV1-51P01701 117 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 HLA-DMBP28068 263 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
NR1I3-230ENST00000511944 HIST1H1AQ02539 215 aaPredicted RBP6.8□□□□□ -1.32
NR1I3-230ENST00000511944 EBLN2Q6P2I7 272 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 TMEM61Q8N0U2 210 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 C11orf44Q8N8P7 122 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 ZC2HC1AQ96GY0 325 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 VGLL1Q99990 258 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 MCRIP2Q9BUT9 160 aaKnown RBP6.8□□□□□ -1.32
NR1I3-230ENST00000511944 AGPAT4-IT1Q9H0P7 198 aa6.8□□□□□ -1.32
NR1I3-230ENST00000511944 RPP21Q9H633 154 aaKnown RBP6.8□□□□□ -1.32
NR1I3-230ENST00000511944 CYSRT1A8MQ03 144 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 FABP5P3A8MUU1 101 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 ZNF705GA8MUZ8 300 aaPredicted RBP6.79□□□□□ -1.32
NR1I3-230ENST00000511944 PRAC2D3DTV9 90 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 RAB5AP20339 215 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 EDN2P20800 178 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 TSPOP30536 169 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 FAM3BP58499 235 aaPredicted RBP6.79□□□□□ -1.32
NR1I3-230ENST00000511944 OR5I1Q13606 314 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 NSUN5P1Q3KNT7 163 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 ATP5L2Q7Z4Y8 100 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 TMEM158Q8WZ71 300 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 DUX3Q96PT4 197 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 ZNF747Q9BV97 191 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 GPR61Q9BZJ8 451 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 RNASE7Q9H1E1 156 aaKnown RBP6.79□□□□□ -1.32
NR1I3-230ENST00000511944 C2CD3Q4AC94 2353 aa6.79□□□□□ -1.32
NR1I3-230ENST00000511944 A0A1B0GW15 77 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 ZNF688P0C7X2 276 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 HLA-DRB4P13762 266 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 LEPP41159 167 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
NR1I3-230ENST00000511944 PSMG4Q5JS54 123 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 IGFL4Q6B9Z1 124 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 PRR27Q6MZM9 219 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 FAM24BQ8N5W8 94 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 NHLRC2Q8NBF2 726 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 AURKAIP1Q9NWT8 199 aaPredicted RBP6.78□□□□□ -1.32
NR1I3-230ENST00000511944 NAT8BQ9UHF3 227 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 ZNF256Q9Y2P7 627 aaPredicted RBP6.78□□□□□ -1.32
NR1I3-230ENST00000511944 HLA-DRB4X5D2U9 266 aa6.78□□□□□ -1.32
NR1I3-230ENST00000511944 SETXQ7Z333 2677 aaKnown RBP6.78□□□□□ -1.32
NR1I3-230ENST00000511944 CUBNO60494 3623 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 TRAV21A0A0B4J279 112 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 A0A1W2PPQ1 181 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 KLLNB2CW77 178 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 SAP30O75446 220 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 AMBPP02760 352 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 MT-ND6P03923 174 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 ERCC8Q13216 396 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 KRTAP24-1Q3LI83 254 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 C9orf66Q5T8R8 295 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 ZFAND2AQ8N6M9 145 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 FAM210BQ96KR6 192 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 SGK494Q96LW2 274 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 SRD5A3Q9H8P0 318 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 NF1P21359 2839 aa6.77□□□□□ -1.33
NR1I3-230ENST00000511944 IGKV3-7A0A075B6H7 116 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 IZUMO1RA6ND01 250 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 SH2D1AO60880 128 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 S100A8P05109 93 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 RNF151Q2KHN1 245 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 BEAN1Q3B7T3 259 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 WDR73Q6P4I2 378 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 LINC00322Q6ZN03 302 aaPredicted RBP6.76□□□□□ -1.33
NR1I3-230ENST00000511944 OR2D3Q8NGH3 330 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 Q8TAT8 98 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 C8orf49Q96NF6 230 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 C20orf144Q9BQM9 153 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 MAP6D1Q9H9H5 199 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 URGCP-MRPS24S4R325 110 aa6.76□□□□□ -1.33
NR1I3-230ENST00000511944 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
NR1I3-230ENST00000511944 TFPI2P48307 235 aa6.75□□□□□ -1.33
NR1I3-230ENST00000511944 CRIP1P50238 77 aa6.75□□□□□ -1.33
NR1I3-230ENST00000511944 DNLZQ5SXM8 178 aa6.75□□□□□ -1.33
NR1I3-230ENST00000511944 NEU1Q99519 415 aa6.75□□□□□ -1.33
NR1I3-230ENST00000511944 GNB1LQ9BYB4 327 aa6.75□□□□□ -1.33
NR1I3-230ENST00000511944 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
NR1I3-230ENST00000511944 TGIF2-C20orf24A0A0A6YYL0 155 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms