RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SPTBP11277 2137 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 MUC4Q99102 2169 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 TRBV7-6A0A0J9YX20 115 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 TMEM189A5PLL7 270 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 J3KT08 172 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 UQCRQO14949 82 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 DPM2O94777 84 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 HBDP02042 147 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 RPS3P23396 243 aaKnown RBP eCLIP0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 CKS2P33552 79 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 ZNF137PP52743 207 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 FXYD6P3P58550 94 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 PSPHP78330 225 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 C6orf52Q5T4I8 152 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 TMEM244Q5VVB8 128 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 OR8I2Q8N0Y5 310 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 MORN4Q8NDC4 146 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 CCL4L1Q8NHW4 92 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 BRK1Q8WUW1 75 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 LZICQ8WZA0 190 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 CLEC2BQ92478 149 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 CCL19Q99731 98 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 MPC1Q9Y5U8 109 aa0.51□□□□□ -2.33
TRAPPC11-207ENST00000511409 IGHV1-24A0A0C4DH33 117 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 A0A0D9SG42 100 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 A0A0J9YY99 117 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 LOC107984640A0A0U1RRK4 108 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 A0A1W2PPB8 328 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 A0A1W2PRS3 328 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 IFITM5A6NNB3 132 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 KIR3DP1A8MWS1 328 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 GYPBP06028 91 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 SCGB1A1P11684 91 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 HIST1H1BP16401 226 aaKnown RBP0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 PDE6GP18545 87 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 SDC4P31431 198 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 SNRPD3P62318 126 aaKnown RBP0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 CCDC153Q494R4 210 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 CCSMST1Q4G0I0 132 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 Q6ZS92 163 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 TCTE3Q8IZS6 198 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 ATOH7Q8N100 152 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 C10orf111Q8N326 155 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 TCTEX1D1Q8N7M0 179 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 OR5A2Q8NGI9 324 aa0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 MAGOHBQ96A72 148 aaKnown RBP0.5□□□□□ -2.33
TRAPPC11-207ENST00000511409 A2MP01023 1474 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 TRAV36DV7A0A075B6V5 113 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 C9JAW5 83 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 J3QR89 54 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 EDF1O60869 148 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 TNFSF15O95150 251 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 MT-ND4LP03901 98 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 SCTP09683 121 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 PCBD1P61457 104 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 RHOHQ15669 191 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 HSD17B12Q53GQ0 312 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 IDO2Q6ZQW0 420 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 OR4S1Q8NGB4 309 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 OR8J3Q8NGG0 315 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 OR51A4Q8NGJ6 313 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 NAT14Q8WUY8 206 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 MAFIPQ8WZ33 124 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 HIGD1AQ9Y241 93 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 ZNF462Q96JM2 2506 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 ANKRD31Q8N7Z5 1873 aa0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 NUP210Q8TEM1 1887 aaPredicted RBP0.49□□□□□ -2.33
TRAPPC11-207ENST00000511409 ANKRD30AQ9BXX3 1397 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 PNMA8CA0A1B0GUJ8 204 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 A0A1B0GX51 115 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 TMEM30CPA0ZSE6 113 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 IGHV3-30P01768 117 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 TCRAP04437 139 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 SLC25A5P05141 298 aaKnown RBP0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 IGHV3-30-5P0DP03 117 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 CCL4P13236 92 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 OR8B8Q15620 311 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 ASB16-AS1Q495Z4 193 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 IZUMO2Q6UXV1 221 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 MMGT1Q8N4V1 131 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 PLAC4Q8WY50 150 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 LPAR5Q9H1C0 372 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 MRPL36Q9P0J6 103 aaKnown RBP0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 COMMD3Q9UBI1 195 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 JPT1Q9UK76 154 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 DLC1Q96QB1 1528 aa0.48□□□□□ -2.33
TRAPPC11-207ENST00000511409 A0A0G2JMM0 328 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 OR2H2O95918 312 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 RBP4P02753 201 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 SPINK7P58062 85 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 CKS1BP61024 79 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 NCS1P62166 190 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 QRFPP83859 136 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 ALX1Q15699 326 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 UNQ5815/PRO19632Q6UWF5 114 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 TMEM91Q6ZNR0 172 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 VPS25Q9BRG1 176 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 GSKIPQ9P0R6 139 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 ZDBF2Q9HCK1 2354 aa0.47□□□□□ -2.33
TRAPPC11-207ENST00000511409 MED23Q9ULK4 1368 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms