RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 NKX6-2Q9C056 277 aaPredicted RBP8.44□□□□□ -1.06
CHFR-208ENST00000511001 OR51M1Q9H341 326 aa8.44□□□□□ -1.06
CHFR-208ENST00000511001 IGKV2-40A0A087WW87 121 aaPredicted RBP8.43□□□□□ -1.06
CHFR-208ENST00000511001 C7orf71A4D174 169 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 ZNF324O75467 553 aaPredicted RBP8.43□□□□□ -1.06
CHFR-208ENST00000511001 SNAPINO95295 136 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 IGKV2D-40P01614 121 aaPredicted RBP8.43□□□□□ -1.06
CHFR-208ENST00000511001 APOC3P02656 99 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 SLC25A5P05141 298 aaKnown RBP8.43□□□□□ -1.06
CHFR-208ENST00000511001 SEC11BP0C7V7 166 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 RPL12P30050 165 aaKnown RBP8.43□□□□□ -1.06
CHFR-208ENST00000511001 C9orf47Q6ZRZ4 202 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 LINC00477Q96M19 166 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 PYGO2Q9BRQ0 406 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 PAXXQ9BUH6 204 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 SMIM3Q9BZL3 60 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 WFDC1Q9HC57 220 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 KCNIP2Q9NS61 270 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 FUT9Q9Y231 359 aa8.43□□□□□ -1.06
CHFR-208ENST00000511001 BORCS7-ASMTA0A0B4J1R7 106 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 OR10J4P0C629 311 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 CRISP2P16562 243 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 FLI1Q01543 452 aaPredicted RBP8.42□□□□□ -1.06
CHFR-208ENST00000511001 FFAR4Q5NUL3 377 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 PRR9Q5T870 116 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 ZFAND2AQ8N6M9 145 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 C11orf72Q8NBR9 251 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 TMED6Q8WW62 240 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 VGLL1Q99990 258 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 SMDT1Q9H4I9 107 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 AAMDCQ9H7C9 122 aa8.42□□□□□ -1.06
CHFR-208ENST00000511001 DYNC1H1Q14204 4646 aaKnown RBP8.42□□□□□ -1.06
CHFR-208ENST00000511001 GAGE12BA1L429 117 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 C17orf112F2Z3M2 114 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 GAGE7O76087 117 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 NUDT3O95989 172 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 GAGE12FP0CL80 117 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 GAGE12GP0CL81 117 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 GAGE12IP0CL82 117 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 Q6ZQT7 251 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 ZNF492Q9P255 531 aa8.41□□□□□ -1.06
CHFR-208ENST00000511001 PKD1P98161 4303 aa8.4□□□□□ -1.06
CHFR-208ENST00000511001 SNURFLB1AK76 121 aa8.4□□□□□ -1.06
CHFR-208ENST00000511001 EIF3GO75821 320 aaKnown RBP eCLIP8.4□□□□□ -1.06
CHFR-208ENST00000511001 HOXA5P20719 270 aa8.4□□□□□ -1.06
CHFR-208ENST00000511001 FAM3BP58499 235 aaPredicted RBP8.4□□□□□ -1.06
CHFR-208ENST00000511001 DAZ2Q13117 558 aaKnown RBP8.4□□□□□ -1.06
CHFR-208ENST00000511001 SMUG1Q53HV7 270 aa8.4□□□□□ -1.06
CHFR-208ENST00000511001 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 PRSS29PA6NIE9 313 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 OR7C2O60412 319 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 IFNA5P01569 189 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 RNASE4P34096 147 aaKnown RBP8.39□□□□□ -1.07
CHFR-208ENST00000511001 ANXA2RQ3ZCQ2 193 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 TMEM78Q5T7P6 136 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 RPL7L1Q6DKI1 246 aaKnown RBP8.39□□□□□ -1.07
CHFR-208ENST00000511001 Q6ZTI0 123 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 SCGB1C1Q8TD33 95 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 Q9H3A6 140 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 GSN-AS1Q9NRJ2 163 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 LINC00588Q9Y4M8 146 aa8.39□□□□□ -1.07
CHFR-208ENST00000511001 UMAD1C9J7I0 102 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 F8W036 122 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 GPX1P07203 203 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 TCL1AP56279 114 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 RANP62826 216 aaKnown RBP8.38□□□□□ -1.07
CHFR-208ENST00000511001 UBE2L3P68036 154 aaKnown RBP8.38□□□□□ -1.07
CHFR-208ENST00000511001 OR5I1Q13606 314 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 ZNF266Q14584 549 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 ATRAIDQ6UW56 229 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 LYPD1Q8N2G4 141 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.38□□□□□ -1.07
CHFR-208ENST00000511001 Q8TAT8 98 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 RXFP4Q8TDU9 374 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 ATG101Q9BSB4 218 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 TMPRSS5Q9H3S3 457 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 KLF12Q9Y4X4 402 aa8.38□□□□□ -1.07
CHFR-208ENST00000511001 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
CHFR-208ENST00000511001 TRBV7-9A0A0J9YWB2 115 aa8.37□□□□□ -1.07
CHFR-208ENST00000511001 RBAKDNA6NC62 111 aa8.37□□□□□ -1.07
CHFR-208ENST00000511001 ADCYAP1P18509 176 aa8.37□□□□□ -1.07
CHFR-208ENST00000511001 ZNF138P52744 262 aa8.37□□□□□ -1.07
CHFR-208ENST00000511001 KHDC3LQ587J8 217 aa8.37□□□□□ -1.07
CHFR-208ENST00000511001 C18orf15Q96N68 181 aa8.37□□□□□ -1.07
CHFR-208ENST00000511001 TP53TG3Q9ULZ0 132 aa8.37□□□□□ -1.07
CHFR-208ENST00000511001 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 A0A0J9YY99 117 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 DIRC3C9JPN6 131 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 SPINK4O60575 86 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 CCL18P55774 89 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 TAS2R45P59539 299 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 RAB2AP61019 212 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 PEA15Q15121 130 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 ACOT6Q3I5F7 207 aaPredicted RBP8.36□□□□□ -1.07
CHFR-208ENST00000511001 IBA57Q5T440 356 aaKnown RBP8.36□□□□□ -1.07
CHFR-208ENST00000511001 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 DPPA3Q6W0C5 159 aa8.36□□□□□ -1.07
CHFR-208ENST00000511001 GNPNAT1Q96EK6 184 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms