RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 C9orf163Q8N9P6 203 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 RNASEH2CQ8TDP1 164 aaKnown RBP3.58□□□□□ -1.84
USP53-206ENST00000510737 TXNDC17Q9BRA2 123 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 SLC25A31Q9H0C2 315 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 SLC25A22Q9H936 323 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 DAZ3Q9NR90 486 aaKnown RBP3.58□□□□□ -1.84
USP53-206ENST00000510737 MRPL16Q9NX20 251 aaKnown RBP3.58□□□□□ -1.84
USP53-206ENST00000510737 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
USP53-206ENST00000510737 SNRPGP15A8MWD9 76 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 ORM1P02763 201 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 HSMCR30P0CW71 290 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 TCL1AP56279 114 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 TAS2R20P59543 309 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 CIRBPQ14011 172 aaKnown RBP3.57□□□□□ -1.84
USP53-206ENST00000510737 IBA57Q5T440 356 aaKnown RBP3.57□□□□□ -1.84
USP53-206ENST00000510737 IDNKQ5T6J7 187 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 SPINK6Q6UWN8 80 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 DPPA3Q6W0C5 159 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 OR4D5Q8NGN0 318 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 ATP6V0E2Q8NHE4 81 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 BORCS5Q969J3 196 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 RRP15Q9Y3B9 282 aaKnown RBP3.57□□□□□ -1.84
USP53-206ENST00000510737 USH2AO75445 5202 aa3.57□□□□□ -1.84
USP53-206ENST00000510737 LINC00854A0A1B0GVQ3 168 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 IFITM5A6NNB3 132 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 GPR31O00270 319 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 MYL12BO14950 172 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 GYG2O15488 501 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 PITX3O75364 302 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 CT45A10P0DMU9 189 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 HRH1P35367 487 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 PPT1P50897 306 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 ETFRF1Q6IPR1 90 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 LAIR2Q6ISS4 152 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 ZNF680Q8NEM1 530 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 RPUSD4Q96CM3 377 aaKnown RBP3.56□□□□□ -1.84
USP53-206ENST00000510737 ZNF2Q9BSG1 426 aaPredicted RBP3.56□□□□□ -1.84
USP53-206ENST00000510737 ENY2Q9NPA8 101 aa3.56□□□□□ -1.84
USP53-206ENST00000510737 IGKV2D-24A0A075B6R9 120 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 IGKV1OR2-108A0A075B7D4 117 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 TRAV8-1A0A0A6YYK1 113 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 A0A0G2JRQ6 117 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 H7C1H1 209 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 CASQ2O14958 399 aaPredicted RBP3.55□□□□□ -1.84
USP53-206ENST00000510737 ARL6IP5O75915 188 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 RANBP1P43487 201 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 CBX5P45973 191 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 PRR3P79522 188 aaKnown RBP3.55□□□□□ -1.84
USP53-206ENST00000510737 FABP5Q01469 135 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 C10orf67Q8IYJ2 551 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 EIF4E3Q8N5X7 224 aaKnown RBP3.55□□□□□ -1.84
USP53-206ENST00000510737 NHLRC2Q8NBF2 726 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 DPH3Q96FX2 82 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 PDCD10Q9BUL8 212 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 CCDC90BQ9GZT6 254 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 FXYD6Q9H0Q3 95 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 PSORS1C1Q9UIG5 152 aa3.55□□□□□ -1.84
USP53-206ENST00000510737 LSM2Q9Y333 95 aaKnown RBP3.55□□□□□ -1.84
USP53-206ENST00000510737 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
USP53-206ENST00000510737 CHTF8P0CG12 524 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 SPCS3P61009 180 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 MEF2DQ14814 521 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 SPHARQ15513 63 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 DNAL1Q4LDG9 190 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 Q6ZQT7 251 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 C14orf178Q8N769 122 aaPredicted RBP3.54□□□□□ -1.84
USP53-206ENST00000510737 OR10G4Q8NGN3 311 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 ZC2HC1AQ96GY0 325 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 EHFQ9NZC4 300 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 TMEM56-RWDD3S4R434 201 aa3.54□□□□□ -1.84
USP53-206ENST00000510737 MEIS3P1A6NDR6 274 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 GGTLC3B5MD39 225 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 ATG12O94817 140 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 PMP2P02689 132 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 PFN1P07737 140 aaKnown RBP3.53□□□□□ -1.84
USP53-206ENST00000510737 ORM2P19652 201 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 AARDQ4LEZ3 155 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 STEAP1BQ6NZ63 245 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 AHSA2Q719I0 299 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 C7orf33Q8WU49 177 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 GPR82Q96P67 336 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 KIR2DL4Q99706 377 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 DIABLOQ9NR28 239 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 CYTL1Q9NRR1 136 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 PLAC8Q9NZF1 115 aa3.53□□□□□ -1.84
USP53-206ENST00000510737 TRAV1-2A0A0B4J238 106 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 MUC21A0A0G2JKD1 596 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 C7orf71A4D174 169 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 SNRPCP09234 159 aaKnown RBP3.52□□□□□ -1.85
USP53-206ENST00000510737 LEPP41159 167 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 BTN1A1Q13410 526 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 NMSQ5H8A3 153 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 OR10P1Q8NGE3 313 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 CYGBQ8WWM9 190 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 PYDC1Q8WXC3 89 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 UFD1Q92890 307 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 RMI2Q96E14 147 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 RNF185Q96GF1 192 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 TP53RKQ96S44 253 aa3.52□□□□□ -1.85
USP53-206ENST00000510737 FKBP14Q9NWM8 211 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms