RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 ATP6V0E1O15342 81 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 CIDEAO60543 219 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 PF4P02776 101 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 CLEC3BP05452 202 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 PLNP26678 52 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 ERCC8Q13216 396 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 TMEM78Q5T7P6 136 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 C8orf86Q6ZUL3 223 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 METTL26Q96S19 204 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 IGKV2D-26A0A0A0MRZ7 120 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 GAS8-AS1O95177 125 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 SMIM13P0DJ93 91 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 KLRB1Q12918 225 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 TMEM158Q8WZ71 300 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 LINC01549A6NIU2 74 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 SOCS3O14543 225 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 NXPH4O95158 308 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 C5orf56Q8N8D9 126 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 LINC00477Q96M19 166 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 CHAC1Q9BUX1 264 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 CSTL1Q9H114 145 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 H3BUT2 72 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 IGHV3-23P01764 117 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 TRBV25-1A0A075B6N4 114 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 E9PLD3 99 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 CDSNQ15517 529 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 CEND1Q8N111 149 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 ZNF580Q9UK33 172 aa7.05□□□□□ -1.28
PDGFRA-208ENST00000509490 OVOL1O14753 267 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 LY6HO94772 140 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 FABP2P12104 132 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 NMUP48645 174 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 EFNA4P52798 201 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 LMO4P61968 165 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 ORMDL2Q53FV1 153 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 ERASQ7Z444 233 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 MYOZ3Q8TDC0 251 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 TOMM6Q96B49 74 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 SMIM2Q9BVW6 85 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 TIMM8BQ9Y5J9 83 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 PKDREJQ9NTG1 2253 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 PPP1R17O96001 155 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 TRGV3P03979 118 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 IGFL4Q6B9Z1 124 aa7.04□□□□□ -1.28
PDGFRA-208ENST00000509490 TMEM8BA6NDV4 472 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 IGF1P05019 195 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 SAMD5Q5TGI4 173 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 RNF182Q8N6D2 247 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 FOXC2Q99958 501 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 SPCS1Q9Y6A9 102 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 F8VRH5 84 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 NDUFA4O00483 81 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 NPFFO15130 113 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 PRSS1P07477 247 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 SAA4P35542 130 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 UQCRFS1P47985 274 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 FXYD2P54710 66 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 FXYD7P58549 80 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 ATP5G2Q06055 141 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 ZC2HC1BQ5TFG8 222 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 ZFAND2AQ8N6M9 145 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 ANKRD11Q6UB99 2663 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 CFAP47Q6ZTR5 3102 aa7.03□□□□□ -1.28
PDGFRA-208ENST00000509490 TRBV7-3A0A075B6L6 115 aa7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 RNF223E7ERA6 249 aa7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 H7C1H1 209 aa7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 GATA1P15976 413 aaPredicted RBP7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 CLEC19AQ6UXS0 136 aa7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 GPHB5Q86YW7 130 aa7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 VPS25Q9BRG1 176 aa7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 MEGF9Q9H1U4 602 aa7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 MOB4Q9Y3A3 225 aa7.02□□□□□ -1.28
PDGFRA-208ENST00000509490 NEXN-AS1Q8NBZ9 246 aa7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 MRPL35Q9NZE8 188 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 POLEQ07864 2286 aa7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 TRAV21A0A0B4J279 112 aa7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 ZNF207O43670 478 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 ECSCRQ19T08 205 aa7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 C18orf15Q96N68 181 aa7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 AKAP13Q12802 2813 aa7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 APC2O95996 2303 aa7.02□□□□□ -1.29
PDGFRA-208ENST00000509490 EP300Q09472 2414 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 ABCA1O95477 2261 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 IGHV4OR15-8A0A075B7B6 117 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 A0A087WW49 117 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 IGHV1-69DA0A0B4J2H0 117 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 RNF151Q2KHN1 245 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 FOXI2Q6ZQN5 318 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 USMG5Q96IX5 58 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 DPH3P1Q9H4G8 78 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 ZZEF1O43149 2961 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 ROS1P08922 2347 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 TRAV41A0A0B4J266 112 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 PRR9Q5T870 116 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 SAMD13Q5VXD3 122 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 WFDC12Q8WWY7 111 aa7.01□□□□□ -1.29
PDGFRA-208ENST00000509490 A0A1W2PPR1 153 aa7□□□□□ -1.29
PDGFRA-208ENST00000509490 F8W1H4 67 aa7□□□□□ -1.29
PDGFRA-208ENST00000509490 SUMO2P61956 95 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms