RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 UPK1BO75841 260 aa10.6□□□□□ -0.71
TPM3-219ENST00000509409 CDK2AP2O75956 126 aa10.6□□□□□ -0.71
TPM3-219ENST00000509409 SLAQ13239 276 aa10.6□□□□□ -0.71
TPM3-219ENST00000509409 Q8TAT8 98 aa10.6□□□□□ -0.71
TPM3-219ENST00000509409 SCGB1C1Q8TD33 95 aa10.6□□□□□ -0.71
TPM3-219ENST00000509409 PHYHIPLQ96FC7 376 aa10.6□□□□□ -0.71
TPM3-219ENST00000509409 ST6GAL2Q96JF0 529 aa10.6□□□□□ -0.71
TPM3-219ENST00000509409 ABCA13Q86UQ4 5058 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 SIVA1O15304 175 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 IFNA5P01569 189 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 ZNF415Q09FC8 603 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 FFAR4Q5NUL3 377 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 MUC21Q5SSG8 566 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 MAPKAPK5-AS1Q8N8E1 139 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 ATP5SQ99766 215 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 PRO0255Q9UI72 69 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 HHLA3Q9XRX5 114 aa10.59□□□□□ -0.71
TPM3-219ENST00000509409 SSNA1O43805 119 aa10.58□□□□□ -0.72
TPM3-219ENST00000509409 BTF3P20290 206 aaKnown RBP10.58□□□□□ -0.72
TPM3-219ENST00000509409 LYPD1Q8N2G4 141 aa10.58□□□□□ -0.72
TPM3-219ENST00000509409 PPP1R1CQ8WVI7 109 aa10.58□□□□□ -0.72
TPM3-219ENST00000509409 HYLS1Q96M11 299 aa10.58□□□□□ -0.72
TPM3-219ENST00000509409 C8orf49Q96NF6 230 aa10.58□□□□□ -0.72
TPM3-219ENST00000509409 TRGV4A0A0C4DH28 118 aa10.57□□□□□ -0.72
TPM3-219ENST00000509409 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
TPM3-219ENST00000509409 RBAKDNA6NC62 111 aa10.57□□□□□ -0.72
TPM3-219ENST00000509409 NXPH4O95158 308 aa10.57□□□□□ -0.72
TPM3-219ENST00000509409 LINC00315P59091 139 aa10.57□□□□□ -0.72
TPM3-219ENST00000509409 TAS2R45P59539 299 aa10.57□□□□□ -0.72
TPM3-219ENST00000509409 UBE2L3P68036 154 aaKnown RBP10.57□□□□□ -0.72
TPM3-219ENST00000509409 SMIM3Q9BZL3 60 aa10.57□□□□□ -0.72
TPM3-219ENST00000509409 HSPB11Q9Y547 144 aa10.57□□□□□ -0.72
TPM3-219ENST00000509409 DNAH5Q8TE73 4624 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 PET100P0DJ07 73 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 CRYBA4P53673 196 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 H2BFSP57053 126 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 KRTAP10-2P60368 255 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 IFITM3Q01628 133 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 FHL2Q14192 279 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 ZNF266Q14584 549 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 MRPL23Q16540 153 aaKnown RBP10.56□□□□□ -0.72
TPM3-219ENST00000509409 KHDC3LQ587J8 217 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 FAM159AQ6UWV7 190 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 MDFICQ9P1T7 246 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 RPH3ALQ9UNE2 315 aa10.56□□□□□ -0.72
TPM3-219ENST00000509409 PGPA6NDG6 321 aa10.55□□□□□ -0.72
TPM3-219ENST00000509409 DIRC3C9JPN6 131 aa10.55□□□□□ -0.72
TPM3-219ENST00000509409 MPC2O95563 127 aa10.55□□□□□ -0.72
TPM3-219ENST00000509409 RPL12P30050 165 aaKnown RBP10.55□□□□□ -0.72
TPM3-219ENST00000509409 TMEM183BQ1AE95 376 aa10.55□□□□□ -0.72
TPM3-219ENST00000509409 LYPD5Q6UWN5 251 aa10.55□□□□□ -0.72
TPM3-219ENST00000509409 TMEM183AQ8IXX5 376 aa10.55□□□□□ -0.72
TPM3-219ENST00000509409 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
TPM3-219ENST00000509409 TRGV11A0A075B6L2 103 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 EREGO14944 169 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 EIF3GO75821 320 aaKnown RBP eCLIP10.54□□□□□ -0.72
TPM3-219ENST00000509409 SFTA3P0C7M3 94 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 FAM74A1Q5RGS3 127 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 NEGR1Q7Z3B1 354 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
TPM3-219ENST00000509409 MARVELD1Q9BSK0 173 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 SPXQ9BT56 116 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 MBD2Q9UBB5 411 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 NAGKQ9UJ70 344 aa10.54□□□□□ -0.72
TPM3-219ENST00000509409 TRAV9-2A0A087WT02 112 aa10.53□□□□□ -0.72
TPM3-219ENST00000509409 A0A1W2PPV4 95 aa10.53□□□□□ -0.72
TPM3-219ENST00000509409 DEFA1P59665 94 aa10.53□□□□□ -0.72
TPM3-219ENST00000509409 DEFA3P59666 94 aa10.53□□□□□ -0.72
TPM3-219ENST00000509409 ACOT6Q3I5F7 207 aaPredicted RBP10.53□□□□□ -0.72
TPM3-219ENST00000509409 Q6AWC8 147 aa10.53□□□□□ -0.72
TPM3-219ENST00000509409 ZNF479Q96JC4 524 aa10.53□□□□□ -0.72
TPM3-219ENST00000509409 OTORQ9NRC9 128 aa10.53□□□□□ -0.72
TPM3-219ENST00000509409 LENEPQ9Y5L5 61 aa10.53□□□□□ -0.72
TPM3-219ENST00000509409 SRIP30626 198 aa10.52□□□□□ -0.73
TPM3-219ENST00000509409 SCRT2Q9NQ03 307 aa10.52□□□□□ -0.73
TPM3-219ENST00000509409 TNFRSF18Q9Y5U5 241 aa10.52□□□□□ -0.73
TPM3-219ENST00000509409 GNRH2O43555 120 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 GYPEP15421 78 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 GOLT1AQ6ZVE7 132 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 NFE4Q86UQ8 179 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 IQCF2Q8IXL9 164 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 OR10G4Q8NGN3 311 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 RASL10AQ92737 203 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 WFDC1Q9HC57 220 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 LY96Q9Y6Y9 160 aa10.51□□□□□ -0.73
TPM3-219ENST00000509409 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
TPM3-219ENST00000509409 K7EQD1 137 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 ORM1P02763 201 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 ERVFC1-1P60608 527 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 PQLC2Q6ZP29 291 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 Q6ZRN7 208 aaPredicted RBP10.5□□□□□ -0.73
TPM3-219ENST00000509409 Q8N1X5 172 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 OR4C5Q8NGB2 326 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 TMED6Q8WW62 240 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 PTTG2Q9NZH5 202 aa10.5□□□□□ -0.73
TPM3-219ENST00000509409 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
TPM3-219ENST00000509409 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
TPM3-219ENST00000509409 TXNDC17Q9BRA2 123 aa10.49□□□□□ -0.73
TPM3-219ENST00000509409 TREM1Q9NP99 234 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms