RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 IGKV1D-37A0A075B6S9 117 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.41□□□□□ -2.02
RNF4-211ENST00000509206 TRAV4A0A0B4J268 109 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 C3orf85A0A1B0GTC6 90 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 SMIM30A4D0T7 59 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 A4D1N5 150 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 CCSO14618 274 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 IFNA7P01567 189 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 CRPP02741 224 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 IL5P05113 134 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 SNRPCP09234 159 aaKnown RBP2.41□□□□□ -2.02
RNF4-211ENST00000509206 HLA-DMAP28067 261 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 RCVRNP35243 200 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 ATP5IP56385 69 aaPredicted RBP2.41□□□□□ -2.02
RNF4-211ENST00000509206 POLR2GP62487 172 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNF4-211ENST00000509206 RAB11AP62491 216 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 PRR3P79522 188 aaKnown RBP2.41□□□□□ -2.02
RNF4-211ENST00000509206 FABP5Q01469 135 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 BTN1A1Q13410 526 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 RHOHQ15669 191 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 TMEM183BQ1AE95 376 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 ZNF674Q2M3X9 581 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 NMSQ5H8A3 153 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 LCN15Q6UWW0 184 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 SDIM1Q6ZPB5 146 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 TMEM183AQ8IXX5 376 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 OR10G9Q8NGN4 311 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 OR1S1Q8NH92 325 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 OCC1Q8TAD7 63 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 LHFPL5Q8TAF8 219 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 Q8TAT8 98 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 LINC00479Q96M42 142 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 ODF3Q96PU9 254 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 SPXQ9BT56 116 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 FXYD6Q9H0Q3 95 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 RHBDL2Q9NX52 303 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 SCN3BQ9NY72 215 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 COPZ2Q9P299 210 aa2.41□□□□□ -2.02
RNF4-211ENST00000509206 A0A087WWC5 75 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 A0A087X0K7 114 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 FBLL1A6NHQ2 334 aaKnown RBP2.4□□□□□ -2.03
RNF4-211ENST00000509206 PMS2P5A8MQ11 134 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 PRAC2D3DTV9 90 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 TMEM262E9PQX1 116 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 PRSS1P07477 247 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 CXCL2P19875 107 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 PIGPP57054 158 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 AKR1C1Q04828 323 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 MEF2DQ14814 521 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 OPCMLQ14982 345 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 GUK1Q16774 197 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 MAJINQ3KP22 176 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 SP6Q3SY56 376 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 ZFP1Q6P2D0 407 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 ACOT7LQ6ZUV0 252 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 C8orf59Q8N0T1 100 aaPredicted RBP2.4□□□□□ -2.03
RNF4-211ENST00000509206 DHRSXQ8N5I4 330 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 TMEM75Q8N9X5 138 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 CCDC71LQ8N9Z2 235 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 MARCH1Q8TCQ1 289 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 DTD1Q8TEA8 209 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 RASL10AQ92737 203 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 LINC00477Q96M19 166 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 SHANK2-AS3Q9BTD1 123 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 KRTAP9-8Q9BYQ0 159 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 SRRQ9GZT4 340 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 ZNF331Q9NQX6 463 aaPredicted RBP2.4□□□□□ -2.03
RNF4-211ENST00000509206 SLC39A9Q9NUM3 307 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 PXMP4Q9Y6I8 212 aa2.4□□□□□ -2.03
RNF4-211ENST00000509206 A0A0A6YYH2 397 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 IGHV3-73A0A0B4J1V6 119 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 TRAV1-1A0A0B4J248 108 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 A0A0G2JRQ6 117 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 LINC00854A0A1B0GVQ3 168 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 SMCO3A2RU48 225 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 C5orf51A6NDU8 294 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 C5orf52A6NGY3 159 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 A6NJ64 397 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 ANKRD65E5RJM6 399 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 H3BRN7 92 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 H3BTX0 84 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 M0R2P5 195 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 B3GALNT1O75752 331 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 OR4E1P0C645 316 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 CHTF8P0CG12 524 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 SULT1A3P0DMM9 295 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 SULT1A4P0DMN0 295 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 GATA1P15976 413 aaPredicted RBP2.39□□□□□ -2.03
RNF4-211ENST00000509206 MLLT11Q13015 90 aaPredicted RBP2.39□□□□□ -2.03
RNF4-211ENST00000509206 ERCC8Q13216 396 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 MUC21Q5SSG8 566 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 TMEM78Q5T7P6 136 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 FAM159AQ6UWV7 190 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 TMEM182Q6ZP80 229 aaPredicted RBP2.39□□□□□ -2.03
RNF4-211ENST00000509206 Q6ZRP5 223 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 NIT1Q86X76 327 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 BPIFA4PQ86YQ2 179 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 SLC25A29Q8N8R3 303 aa2.39□□□□□ -2.03
RNF4-211ENST00000509206 ZFAND1Q8TCF1 268 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms