RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 FAM231CP0DMU5 169 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 EGR2P11161 476 aaPredicted RBP7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 EFNA4P52798 201 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 HERVK_113P63121 156 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 ZNRF1Q8ND25 227 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 TMEM101Q96IK0 257 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 PRR25Q96S07 402 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 SCNM1Q9BWG6 230 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 SPANXDQ9BXN6 97 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 SPANXCQ9NY87 97 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 FAM240AA0A1B0GVK7 77 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 SRRM5B3KS81 715 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 B9A039 149 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 CECR9P0C854 216 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 SLC25A16P16260 332 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 CD40P25942 277 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 PMS2CLQ68D20 193 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 C17orf77Q96MU5 243 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 VKORC1Q9BQB6 163 aa7.79□□□□□ -1.16
PDGFRA-207ENST00000509092 A0A0J9YY99 117 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 TIMM8AO60220 97 aaPredicted RBP7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 IGHV3-30P01768 117 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 IGHV3-30-5P0DP03 117 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 NXPH1P58417 271 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 SRSF2Q01130 221 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 ATXN8Q156A1 80 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 LINC01620Q4KN68 170 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 OOSP1A8MZH6 123 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 UQCRQO14949 82 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 ZNF56Q15929 161 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 ZNF833PQ6ZTB9 187 aa7.78□□□□□ -1.16
PDGFRA-207ENST00000509092 TRBV10-2A0A0K0K1G8 114 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 PRB4P10163 310 aaPredicted RBP7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 MAGEA5P43359 124 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 EBI3Q14213 229 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 TMEM30BQ3MIR4 351 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 DTX2Q86UW9 622 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 TMEM219Q86XT9 240 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 IMUPQ9GZP8 106 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 FAM236AA0A1B0GUQ0 79 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 FAM236BA0A1B0GV22 79 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 M0R3E3 92 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 MZT1Q08AG7 82 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 POM121L12Q8N7R1 296 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 NRACQ8N912 160 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 SHANK2-AS3Q9BTD1 123 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 CTSZQ9UBR2 303 aa7.77□□□□□ -1.17
PDGFRA-207ENST00000509092 IGHV3-33P01772 117 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 EMP1P54849 157 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 RPUSD1Q9UJJ7 312 aaKnown RBP7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 PRR14LQ5THK1 2151 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 DSCAMO60469 2012 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 H3BRN7 92 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 TNFAIP6P98066 277 aaPredicted RBP7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 TEX36Q5VZQ5 186 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 HCP5Q6MZN7 132 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 ZNF575Q86XF7 245 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 SCGB3A1Q96QR1 104 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 ZNRD1Q9P1U0 126 aa7.76□□□□□ -1.17
PDGFRA-207ENST00000509092 IGHV3-21A0A0B4J1V1 117 aa7.75□□□□□ -1.17
PDGFRA-207ENST00000509092 CD3EP07766 207 aa7.75□□□□□ -1.17
PDGFRA-207ENST00000509092 SLC25A45Q8N413 288 aa7.75□□□□□ -1.17
PDGFRA-207ENST00000509092 PSMG3-AS1Q96PY0 264 aa7.75□□□□□ -1.17
PDGFRA-207ENST00000509092 LINC00574Q9H8X3 128 aa7.75□□□□□ -1.17
PDGFRA-207ENST00000509092 SPEGQ15772 3267 aa7.75□□□□□ -1.17
PDGFRA-207ENST00000509092 ARFGEF3Q5TH69 2177 aa7.75□□□□□ -1.17
PDGFRA-207ENST00000509092 IGHV5-10-1A0A0J9YXX1 117 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 RBAKDNA6NC62 111 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 PMVKQ15126 192 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 LPAL2Q16609 132 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 ZNF474Q6S9Z5 364 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 IL17RELQ6ZVW7 336 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 SLC25A29Q8N8R3 303 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 KLHL30-AS1Q8NEE0 82 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 TOMM6Q96B49 74 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 EDA2RQ9HAV5 297 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 IGLV2-23P01705 113 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 ATP5G1P05496 136 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 ZNF80P51504 273 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 PDE6HQ13956 83 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 DEFB121Q5J5C9 76 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 RAI1Q7Z5J4 1906 aaPredicted RBP7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 MUC6Q6W4X9 2439 aa7.74□□□□□ -1.17
PDGFRA-207ENST00000509092 TRGV11A0A075B6L2 103 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 A0A0B4J2C4 111 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 TMEM170BQ5T4T1 132 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 TMEM263Q8WUH6 116 aaKnown RBP7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 EP300Q09472 2414 aaPredicted RBP7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 ORM1P02763 201 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 WT1P19544 449 aaPredicted RBP7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 MFAP4P55083 255 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 HERVK_113P61574 105 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 TCF15Q12870 199 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 ERCC8Q13216 396 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 ORMDL2Q53FV1 153 aa7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 Q6ZS46 218 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms