RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ST6GAL2Q96JF0 529 aa8.6□□□□□ -1.03
PDPN-208ENST00000509009 HSPB11Q9Y547 144 aa8.6□□□□□ -1.03
PDPN-208ENST00000509009 HSPG2P98160 4391 aa8.59□□□□□ -1.03
PDPN-208ENST00000509009 PAX4O43316 350 aa8.59□□□□□ -1.03
PDPN-208ENST00000509009 IGHV3-53P01767 116 aa8.59□□□□□ -1.03
PDPN-208ENST00000509009 RPL12P30050 165 aaKnown RBP8.59□□□□□ -1.03
PDPN-208ENST00000509009 FHL2Q14192 279 aa8.59□□□□□ -1.03
PDPN-208ENST00000509009 ZNF266Q14584 549 aa8.59□□□□□ -1.03
PDPN-208ENST00000509009 FFAR4Q5NUL3 377 aa8.59□□□□□ -1.03
PDPN-208ENST00000509009 SCGB1C1Q8TD33 95 aa8.59□□□□□ -1.03
PDPN-208ENST00000509009 MRPL16Q9NX20 251 aaKnown RBP8.59□□□□□ -1.03
PDPN-208ENST00000509009 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 SSNA1O43805 119 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 CDK2AP2O75956 126 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 IFNA5P01569 189 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 BTF3P20290 206 aaKnown RBP8.58□□□□□ -1.04
PDPN-208ENST00000509009 SLAQ13239 276 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 ARPC5LQ9BPX5 153 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 SMIM3Q9BZL3 60 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 WFDC1Q9HC57 220 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 MDFICQ9P1T7 246 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 PRO0255Q9UI72 69 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 HHLA3Q9XRX5 114 aa8.58□□□□□ -1.04
PDPN-208ENST00000509009 DIRC3C9JPN6 131 aa8.57□□□□□ -1.04
PDPN-208ENST00000509009 SIVA1O15304 175 aa8.57□□□□□ -1.04
PDPN-208ENST00000509009 EIF3GO75821 320 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDPN-208ENST00000509009 CRYBA4P53673 196 aa8.57□□□□□ -1.04
PDPN-208ENST00000509009 UBE2L3P68036 154 aaKnown RBP8.57□□□□□ -1.04
PDPN-208ENST00000509009 MUC21Q5SSG8 566 aa8.57□□□□□ -1.04
PDPN-208ENST00000509009 Q6AWC8 147 aa8.57□□□□□ -1.04
PDPN-208ENST00000509009 C8orf49Q96NF6 230 aa8.57□□□□□ -1.04
PDPN-208ENST00000509009 LENEPQ9Y5L5 61 aa8.57□□□□□ -1.04
PDPN-208ENST00000509009 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
PDPN-208ENST00000509009 PGPA6NDG6 321 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 TAS2R45P59539 299 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 DEFA1P59665 94 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 DEFA3P59666 94 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 ZNF415Q09FC8 603 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 KHDC3LQ587J8 217 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 LYPD5Q6UWN5 251 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 IQCF2Q8IXL9 164 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 HYLS1Q96M11 299 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 MBD2Q9UBB5 411 aa8.56□□□□□ -1.04
PDPN-208ENST00000509009 NXPH4O95158 308 aa8.55□□□□□ -1.04
PDPN-208ENST00000509009 PET100P0DJ07 73 aa8.55□□□□□ -1.04
PDPN-208ENST00000509009 LINC00315P59091 139 aa8.55□□□□□ -1.04
PDPN-208ENST00000509009 MRPL23Q16540 153 aaKnown RBP8.55□□□□□ -1.04
PDPN-208ENST00000509009 Q6ZRN7 208 aaPredicted RBP8.55□□□□□ -1.04
PDPN-208ENST00000509009 TMED6Q8WW62 240 aa8.55□□□□□ -1.04
PDPN-208ENST00000509009 RASL10AQ92737 203 aa8.55□□□□□ -1.04
PDPN-208ENST00000509009 SPXQ9BT56 116 aa8.55□□□□□ -1.04
PDPN-208ENST00000509009 OTORQ9NRC9 128 aa8.55□□□□□ -1.04
PDPN-208ENST00000509009 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 TRGV4A0A0C4DH28 118 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 GNRH2O43555 120 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 SFTA3P0C7M3 94 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 TMEM183BQ1AE95 376 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 ACOT6Q3I5F7 207 aaPredicted RBP8.54□□□□□ -1.04
PDPN-208ENST00000509009 TDRG1Q3Y452 100 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 FAM159AQ6UWV7 190 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 NEGR1Q7Z3B1 354 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 TMEM183AQ8IXX5 376 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 OR10G4Q8NGN3 311 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 TVP23CQ96ET8 276 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 ZNF479Q96JC4 524 aa8.54□□□□□ -1.04
PDPN-208ENST00000509009 PQLC2Q6ZP29 291 aa8.53□□□□□ -1.04
PDPN-208ENST00000509009 MAPKAPK5-AS1Q8N8E1 139 aa8.53□□□□□ -1.04
PDPN-208ENST00000509009 CMTM2Q8TAZ6 248 aa8.53□□□□□ -1.04
PDPN-208ENST00000509009 TNFRSF18Q9Y5U5 241 aa8.53□□□□□ -1.04
PDPN-208ENST00000509009 DNAH5Q8TE73 4624 aa8.52□□□□□ -1.05
PDPN-208ENST00000509009 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
PDPN-208ENST00000509009 A0A1W2PPV4 95 aa8.52□□□□□ -1.05
PDPN-208ENST00000509009 K7EQD1 137 aa8.52□□□□□ -1.05
PDPN-208ENST00000509009 RAB2AP61019 212 aa8.52□□□□□ -1.05
PDPN-208ENST00000509009 FAM74A1Q5RGS3 127 aa8.52□□□□□ -1.05
PDPN-208ENST00000509009 GOLT1AQ6ZVE7 132 aa8.52□□□□□ -1.05
PDPN-208ENST00000509009 IGHV3-16A0A0C4DH30 117 aa8.51□□□□□ -1.05
PDPN-208ENST00000509009 HMGB3O15347 200 aaKnown RBP8.51□□□□□ -1.05
PDPN-208ENST00000509009 OR10G9Q8NGN4 311 aa8.51□□□□□ -1.05
PDPN-208ENST00000509009 OR10G7Q8NGN6 311 aa8.51□□□□□ -1.05
PDPN-208ENST00000509009 NAGKQ9UJ70 344 aa8.51□□□□□ -1.05
PDPN-208ENST00000509009 RPH3ALQ9UNE2 315 aa8.51□□□□□ -1.05
PDPN-208ENST00000509009 TRAV8-1A0A0A6YYK1 113 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 TRAV4A0A0B4J268 109 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 TRAV21A0A0B4J279 112 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 M0R2P5 195 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 APOBP04114 4563 aaKnown RBP8.5□□□□□ -1.05
PDPN-208ENST00000509009 GYPEP15421 78 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 SRIP30626 198 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 GNG5P63218 68 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 Q8N1X5 172 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 TREM1Q9NP99 234 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 ALG5Q9Y673 324 aa8.5□□□□□ -1.05
PDPN-208ENST00000509009 TRAV9-2A0A087WT02 112 aa8.49□□□□□ -1.05
PDPN-208ENST00000509009 ORM1P02763 201 aa8.49□□□□□ -1.05
PDPN-208ENST00000509009 STAG3L2P0CL84 134 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms