RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 IGHV1OR15-1A0A075B7D0 117 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 PGPA6NDG6 321 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 DIRC3C9JPN6 131 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 ANXA2RQ3ZCQ2 193 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 Q5BKY6 102 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 SSX7Q7RTT5 188 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 LYPD1Q8N2G4 141 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 ZNRF2Q8NHG8 242 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 LINC00467Q9BRT7 94 aa10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 MRPL16Q9NX20 251 aaKnown RBP10.32□□□□□ -0.76
UBE2D3-228ENST00000508974 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
UBE2D3-228ENST00000508974 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
UBE2D3-228ENST00000508974 NMBP08949 121 aa10.31□□□□□ -0.76
UBE2D3-228ENST00000508974 TCL1AP56279 114 aa10.31□□□□□ -0.76
UBE2D3-228ENST00000508974 C1orf134Q5TEV5 83 aa10.31□□□□□ -0.76
UBE2D3-228ENST00000508974 CMTM2Q8TAZ6 248 aa10.31□□□□□ -0.76
UBE2D3-228ENST00000508974 OTORQ9NRC9 128 aa10.31□□□□□ -0.76
UBE2D3-228ENST00000508974 RBAKDNA6NC62 111 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 ARL14EPLP0DKL9 152 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 CDC34P49427 236 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 FAM3BP58499 235 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 GNG5P63218 68 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 ZNF266Q14584 549 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 SOHLH1Q5JUK2 328 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 GOLT1AQ6ZVE7 132 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 RXFP4Q8TDU9 374 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 NAGKQ9UJ70 344 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 PKD1P98161 4303 aa10.3□□□□□ -0.76
UBE2D3-228ENST00000508974 NBDYA0A0U1RRE5 68 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 A6NJY4 79 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 SPINK4O60575 86 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 ATP6V0CP27449 155 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 ZNF415Q09FC8 603 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 FAM74A1Q5RGS3 127 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 IBA57Q5T440 356 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 PQLC2Q6ZP29 291 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 AQP10Q96PS8 301 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 SH3BGRL3Q9H299 93 aa10.29□□□□□ -0.76
UBE2D3-228ENST00000508974 FXYD6-FXYD2A0A087WZ82 144 aa10.28□□□□□ -0.76
UBE2D3-228ENST00000508974 TRAV8-1A0A0A6YYK1 113 aa10.28□□□□□ -0.76
UBE2D3-228ENST00000508974 F6UZH7 168 aa10.28□□□□□ -0.76
UBE2D3-228ENST00000508974 GIPP09681 153 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-228ENST00000508974 VSIG2Q96IQ7 327 aa10.28□□□□□ -0.76
UBE2D3-228ENST00000508974 SGK494Q96LW2 274 aa10.28□□□□□ -0.76
UBE2D3-228ENST00000508974 MDFICQ9P1T7 246 aa10.28□□□□□ -0.76
UBE2D3-228ENST00000508974 PKHD1P08F94 4074 aa10.28□□□□□ -0.76
UBE2D3-228ENST00000508974 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.77
UBE2D3-228ENST00000508974 TMEM183BQ1AE95 376 aa10.27□□□□□ -0.77
UBE2D3-228ENST00000508974 ESRGQ1W209 222 aa10.27□□□□□ -0.77
UBE2D3-228ENST00000508974 TMEM183AQ8IXX5 376 aa10.27□□□□□ -0.77
UBE2D3-228ENST00000508974 RAB24Q969Q5 203 aa10.27□□□□□ -0.77
UBE2D3-228ENST00000508974 MUC4Q99102 2169 aa10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 STAG3L2P0CL84 134 aa10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 STAG3L3P0CL85 134 aa10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 Q6AWC8 147 aa10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 RPL7L1Q6DKI1 246 aaKnown RBP10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 FAM159AQ6UWV7 190 aa10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 IQCF2Q8IXL9 164 aa10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 INO80EQ8NBZ0 244 aaPredicted RBP10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 OR2G3Q8NGZ4 309 aa10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 PSMG3Q9BT73 122 aaPredicted RBP10.26□□□□□ -0.77
UBE2D3-228ENST00000508974 A0A096LPF7 62 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 RNF222A6NCQ9 220 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 H3BNG1 76 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 GCHFRP30047 84 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 C6orf223Q8N319 242 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 OR2T35Q8NGX2 323 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 TVP23CQ96ET8 276 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 ST6GAL2Q96JF0 529 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 C18orf15Q96N68 181 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 Q9H8V8 135 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 LENEPQ9Y5L5 61 aa10.25□□□□□ -0.77
UBE2D3-228ENST00000508974 KIAA1109Q2LD37 5005 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 PAX4O43316 350 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 SFTA3P0C7M3 94 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 TNP2Q05952 138 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 RGS21Q2M5E4 152 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 TMED6Q8WW62 240 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 C8orf49Q96NF6 230 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 KRTAP1-5Q9BYS1 174 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 TREM1Q9NP99 234 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 TNFSF18Q9UNG2 199 aa10.24□□□□□ -0.77
UBE2D3-228ENST00000508974 TRGV11A0A075B6L2 103 aa10.23□□□□□ -0.77
UBE2D3-228ENST00000508974 GNRH2O43555 120 aa10.23□□□□□ -0.77
UBE2D3-228ENST00000508974 MBP02144 154 aa10.23□□□□□ -0.77
UBE2D3-228ENST00000508974 ACTR3CQ9C0K3 210 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-228ENST00000508974 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-228ENST00000508974 HERC2O95714 4834 aa10.23□□□□□ -0.77
UBE2D3-228ENST00000508974 BORCS7-ASMTA0A0B4J1R7 106 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 TRAV21A0A0B4J279 112 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 TRGV4A0A0C4DH28 118 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 SERF2P84101 59 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 FHL2Q14192 279 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 ZNF575Q86XF7 245 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 ASB13Q8WXK3 278 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 ZNF479Q96JC4 524 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 ICOSQ9Y6W8 199 aa10.22□□□□□ -0.77
UBE2D3-228ENST00000508974 GGTLC3B5MD39 225 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms