RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ARL17AQ8IVW1 177 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 Q8N2B8 174 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 FAM19A2Q8N3H0 131 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 OR10AG1Q8NH19 301 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 ARL11Q969Q4 196 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 ZNF625Q96I27 306 aaPredicted RBP1.69□□□□□ -2.14
DHFR-204ENST00000508282 SMIM7Q9BQ49 75 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 MED9Q9NWA0 146 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 DNAJC15Q9Y5T4 150 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 MYH6P13533 1939 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 MUC4Q99102 2169 aa1.69□□□□□ -2.14
DHFR-204ENST00000508282 IGHV1-24A0A0C4DH33 117 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 FAM236AA0A1B0GUQ0 79 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 FAM236BA0A1B0GV22 79 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 IFITM5A6NNB3 132 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 MRPS14O60783 128 aaKnown RBP1.68□□□□□ -2.14
DHFR-204ENST00000508282 COX7CP15954 63 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 SELENOWP63302 87 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 MIR22HGQ0VDD5 57 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 NAA38Q9BRA0 125 aaKnown RBP1.68□□□□□ -2.14
DHFR-204ENST00000508282 CDC42SE1Q9NRR8 79 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
DHFR-204ENST00000508282 WDR7Q9Y4E6 1490 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 KIAA1549LQ6ZVL6 1849 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 INTS1Q8N201 2190 aaKnown RBP1.68□□□□□ -2.14
DHFR-204ENST00000508282 MYH7P12883 1935 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 HELZP42694 1942 aaKnown RBP1.68□□□□□ -2.14
DHFR-204ENST00000508282 VWDEQ8N2E2 1590 aa1.68□□□□□ -2.14
DHFR-204ENST00000508282 MUC6Q6W4X9 2439 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 FAM25AB3EWG3 89 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 FAM25CB3EWG5 89 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 FAM25GB3EWG6 89 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 ZNF670-ZNF695F2Z2N8 137 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 H3BRM9 83 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 RRAS2P62070 204 aaPredicted RBP1.67□□□□□ -2.14
DHFR-204ENST00000508282 PLGLB1Q02325 96 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 NEDD8Q15843 81 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 CCSMST1Q4G0I0 132 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 ZCCHC23Q6ZST2 131 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 C15orf53Q8NAA6 179 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 LINC00470Q9BZP3 86 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 SNURFQ9Y675 71 aa1.67□□□□□ -2.14
DHFR-204ENST00000508282 FGD6Q6ZV73 1430 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 SIP14410 1827 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 TRBV6-4A0A1B0GX49 114 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 BBIP1A8MTZ0 92 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 GNG7O60262 68 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 PCOTHQ58A44 107 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 IZUMO2Q6UXV1 221 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 ATOH7Q8N100 152 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 ZNF563Q8TA94 476 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 LSM2Q9Y333 95 aaKnown RBP1.66□□□□□ -2.14
DHFR-204ENST00000508282 ARFGEF3Q5TH69 2177 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 CR1P17927 2039 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 CHD3Q12873 2000 aaKnown RBP1.66□□□□□ -2.14
DHFR-204ENST00000508282 ALPK3Q96L96 1907 aa1.66□□□□□ -2.14
DHFR-204ENST00000508282 EXPH5Q8NEV8 1989 aa1.65□□□□□ -2.14
DHFR-204ENST00000508282 ANK1P16157 1881 aa1.65□□□□□ -2.14
DHFR-204ENST00000508282 TRPM7Q96QT4 1865 aa1.65□□□□□ -2.14
DHFR-204ENST00000508282 CECR2Q9BXF3 1484 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 IBTKQ9P2D0 1353 aaPredicted RBP1.65□□□□□ -2.15
DHFR-204ENST00000508282 TRBV20-1A0A075B6N2 111 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 A0A1B0GV90 55 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 FAM92AA1XBS5 289 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 GUCA1AP43080 201 aaPredicted RBP1.65□□□□□ -2.15
DHFR-204ENST00000508282 EMX2Q04743 252 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 SPCS2Q15005 226 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 MPV17LQ2QL34 196 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 C5orf17Q8NAS9 161 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 TMEM191AQ9H0A3 160 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 SAR1AQ9NR31 198 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 PHLPP1O60346 1717 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 WDR97A6NE52 1622 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 MYOM3Q5VTT5 1437 aa1.65□□□□□ -2.15
DHFR-204ENST00000508282 MYH9P35579 1960 aaKnown RBP1.65□□□□□ -2.15
DHFR-204ENST00000508282 GRIN2AQ12879 1464 aa1.64□□□□□ -2.15
DHFR-204ENST00000508282 NINQ8N4C6 2090 aa1.64□□□□□ -2.15
DHFR-204ENST00000508282 A6NN06 94 aa1.64□□□□□ -2.15
DHFR-204ENST00000508282 M0R129 80 aa1.64□□□□□ -2.15
DHFR-204ENST00000508282 CDC42EP2O14613 210 aa1.64□□□□□ -2.15
DHFR-204ENST00000508282 GEMIN2O14893 280 aaKnown RBP1.64□□□□□ -2.15
DHFR-204ENST00000508282 NUPR1O60356 82 aa1.64□□□□□ -2.15
DHFR-204ENST00000508282 UNC13CQ8NB66 2214 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 A0A0G2JMM0 328 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 A0A1W2PPB8 328 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 KIR3DP1A8MWS1 328 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 M0R2P5 195 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 DLEU1O43261 78 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 HCRTO43612 131 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 DNAL4O96015 105 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 IGHV3-33P01772 117 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 C3orf62Q6ZUJ4 267 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 SNX29P2Q8IUI4 249 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 TCTEX1D1Q8N7M0 179 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 ATP6V0E2Q8NHE4 81 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 CCDC167Q9P0B6 97 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 TMEM14CQ9P0S9 112 aa1.63□□□□□ -2.15
DHFR-204ENST00000508282 NOP16Q9Y3C1 178 aaKnown RBP1.63□□□□□ -2.15
DHFR-204ENST00000508282 TNRC6BQ9UPQ9 1833 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms