RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
DDX41-207ENST00000507900 APRG1Q8IVJ8 170 aa12.45□□□□□ -0.42
DDX41-207ENST00000507900 DUX3Q96PT4 197 aa12.45□□□□□ -0.42
DDX41-207ENST00000507900 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
DDX41-207ENST00000507900 RNF114Q9Y508 228 aa12.45□□□□□ -0.42
DDX41-207ENST00000507900 SELENOKQ9Y6D0 94 aa12.45□□□□□ -0.42
DDX41-207ENST00000507900 NOTCH2Q04721 2471 aa12.45□□□□□ -0.42
DDX41-207ENST00000507900 HAX1O00165 279 aa12.44□□□□□ -0.42
DDX41-207ENST00000507900 TCF21O43680 179 aa12.44□□□□□ -0.42
DDX41-207ENST00000507900 CSN3P07498 182 aa12.44□□□□□ -0.42
DDX41-207ENST00000507900 ZNF705DP0CH99 300 aaPredicted RBP12.44□□□□□ -0.42
DDX41-207ENST00000507900 ZNF705BP0CI00 300 aaPredicted RBP12.44□□□□□ -0.42
DDX41-207ENST00000507900 GDF5OSQ5U4N7 250 aa12.44□□□□□ -0.42
DDX41-207ENST00000507900 CRISP2P16562 243 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 RAB4BP61018 213 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 SNRPD3P62318 126 aaKnown RBP12.43□□□□□ -0.42
DDX41-207ENST00000507900 ZNF575Q86XF7 245 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 ZFAND2AQ8N6M9 145 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 GATD1Q8NB37 220 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 A0A1B0GUT8 65 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 A0A1B0GW15 77 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 CCL24O00175 119 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 CTRLP40313 264 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 PAFAH1B2P68402 229 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 WFDC3Q8IUB2 231 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 HIST3H2BBQ8N257 126 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 NF1P21359 2839 aa12.43□□□□□ -0.42
DDX41-207ENST00000507900 F6UB75 175 aa12.42□□□□□ -0.42
DDX41-207ENST00000507900 CRLF1O75462 422 aa12.42□□□□□ -0.42
DDX41-207ENST00000507900 APCSP02743 223 aa12.42□□□□□ -0.42
DDX41-207ENST00000507900 IGLC6P0CF74 106 aa12.42□□□□□ -0.42
DDX41-207ENST00000507900 DEFB1P60022 68 aa12.42□□□□□ -0.42
DDX41-207ENST00000507900 HIST2H2BDQ6DRA6 164 aa12.42□□□□□ -0.42
DDX41-207ENST00000507900 C11orf44Q8N8P7 122 aa12.42□□□□□ -0.42
DDX41-207ENST00000507900 ODF3Q96PU9 254 aa12.42□□□□□ -0.42
DDX41-207ENST00000507900 ZNF688P0C7X2 276 aa12.41□□□□□ -0.42
DDX41-207ENST00000507900 CAMPP49913 170 aa12.41□□□□□ -0.42
DDX41-207ENST00000507900 SLAQ13239 276 aa12.41□□□□□ -0.42
DDX41-207ENST00000507900 RIGQ13278 110 aa12.41□□□□□ -0.42
DDX41-207ENST00000507900 PRR9Q5T870 116 aa12.41□□□□□ -0.42
DDX41-207ENST00000507900 SIGLEC8Q9NYZ4 499 aa12.41□□□□□ -0.42
DDX41-207ENST00000507900 TMSB15BA0A087X1C1 80 aa12.4□□□□□ -0.42
DDX41-207ENST00000507900 IFITM10A6NMD0 228 aa12.4□□□□□ -0.42
DDX41-207ENST00000507900 ORM1P02763 201 aa12.4□□□□□ -0.42
DDX41-207ENST00000507900 S100A8P05109 93 aa12.4□□□□□ -0.42
DDX41-207ENST00000507900 ARMS2P0C7Q2 107 aa12.4□□□□□ -0.42
DDX41-207ENST00000507900 TFPI2P48307 235 aa12.4□□□□□ -0.42
DDX41-207ENST00000507900 PSMG4Q5JS54 123 aa12.4□□□□□ -0.42
DDX41-207ENST00000507900 GFI1BQ5VTD9 330 aa12.4□□□□□ -0.42
DDX41-207ENST00000507900 IGKV3D-20A0A0C4DH25 116 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 A0A0J9YX75 114 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 A0A1W2PRX2 142 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 ADARB2-AS1A8MUL3 147 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 Q0VG73 95 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 FER1L6-AS1Q8NA97 138 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 CNFNQ9BYD5 112 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 C11orf21Q9P2W6 132 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 NSD1Q96L73 2696 aaPredicted RBP12.39□□□□□ -0.43
DDX41-207ENST00000507900 KLLNB2CW77 178 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 AKR1D1P51857 326 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 DEFB114Q30KQ6 69 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 LYZL1Q6UWQ5 148 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 TMEM61Q8N0U2 210 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 DYNLRB2Q8TF09 96 aa12.39□□□□□ -0.43
DDX41-207ENST00000507900 HIVEP1P15822 2718 aa12.38□□□□□ -0.43
DDX41-207ENST00000507900 TRAV25A0A0B4J276 109 aa12.38□□□□□ -0.43
DDX41-207ENST00000507900 TRAV21A0A0B4J279 112 aa12.38□□□□□ -0.43
DDX41-207ENST00000507900 OR10J3Q5JRS4 329 aa12.38□□□□□ -0.43
DDX41-207ENST00000507900 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
DDX41-207ENST00000507900 A0A1B0GUS0 222 aa12.37□□□□□ -0.43
DDX41-207ENST00000507900 GRIFINA4D1Z8 144 aa12.37□□□□□ -0.43
DDX41-207ENST00000507900 KIAA1644Q3SXP7 199 aa12.37□□□□□ -0.43
DDX41-207ENST00000507900 ZNF493Q6ZR52 646 aa12.37□□□□□ -0.43
DDX41-207ENST00000507900 SSBP4Q9BWG4 385 aaPredicted RBP12.37□□□□□ -0.43
DDX41-207ENST00000507900 TP53TG3Q9ULZ0 132 aa12.37□□□□□ -0.43
DDX41-207ENST00000507900 F2Z2F3 143 aa12.36□□□□□ -0.43
DDX41-207ENST00000507900 DUSP14O95147 198 aaKnown RBP12.36□□□□□ -0.43
DDX41-207ENST00000507900 GPX1P07203 203 aa12.36□□□□□ -0.43
DDX41-207ENST00000507900 SRIP30626 198 aa12.36□□□□□ -0.43
DDX41-207ENST00000507900 EBLN2Q6P2I7 272 aa12.36□□□□□ -0.43
DDX41-207ENST00000507900 SPAG8Q99932 426 aaPredicted RBP12.36□□□□□ -0.43
DDX41-207ENST00000507900 ESDP10768 282 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 S100A2P29034 98 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 LEPP41159 167 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 NDUFA11Q86Y39 141 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 FN1P02751 2386 aaKnown RBP12.35□□□□□ -0.43
DDX41-207ENST00000507900 A8MTW9 85 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 CD300EQ496F6 205 aaPredicted RBP12.35□□□□□ -0.43
DDX41-207ENST00000507900 PDZD11Q5EBL8 140 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 Q6ZQT7 251 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
DDX41-207ENST00000507900 ALKBH7Q9BT30 221 aaPredicted RBP12.35□□□□□ -0.43
DDX41-207ENST00000507900 LOC102724200A0A096LPH7 203 aaPredicted RBP12.34□□□□□ -0.43
DDX41-207ENST00000507900 SNAI2O43623 268 aa12.34□□□□□ -0.43
DDX41-207ENST00000507900 OR5AL1P0C617 328 aa12.34□□□□□ -0.43
DDX41-207ENST00000507900 LINC00310P59036 64 aa12.34□□□□□ -0.43
DDX41-207ENST00000507900 KRTAP10-3P60369 221 aa12.34□□□□□ -0.43
DDX41-207ENST00000507900 OR4C46A6NHA9 309 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms