RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 BATF3Q9NR55 127 aa12.96□□□□□ -0.33
FGFR3-209ENST00000507588 KLF12Q9Y4X4 402 aa12.96□□□□□ -0.33
FGFR3-209ENST00000507588 LENEPQ9Y5L5 61 aa12.96□□□□□ -0.33
FGFR3-209ENST00000507588 HSPG2P98160 4391 aa12.95□□□□□ -0.34
FGFR3-209ENST00000507588 ZNF266Q14584 549 aa12.95□□□□□ -0.34
FGFR3-209ENST00000507588 TTC32Q5I0X7 151 aa12.95□□□□□ -0.34
FGFR3-209ENST00000507588 Q6ZQT7 251 aa12.95□□□□□ -0.34
FGFR3-209ENST00000507588 VSIG2Q96IQ7 327 aa12.95□□□□□ -0.34
FGFR3-209ENST00000507588 ARPC5LQ9BPX5 153 aa12.95□□□□□ -0.34
FGFR3-209ENST00000507588 Q9H8V8 135 aa12.95□□□□□ -0.34
FGFR3-209ENST00000507588 TP53TG3Q9ULZ0 132 aa12.95□□□□□ -0.34
FGFR3-209ENST00000507588 MRPS16Q9Y3D3 137 aaKnown RBP12.95□□□□□ -0.34
FGFR3-209ENST00000507588 TNP2Q05952 138 aa12.94□□□□□ -0.34
FGFR3-209ENST00000507588 ZNF415Q09FC8 603 aa12.94□□□□□ -0.34
FGFR3-209ENST00000507588 ESRGQ1W209 222 aa12.94□□□□□ -0.34
FGFR3-209ENST00000507588 TMED6Q8WW62 240 aa12.94□□□□□ -0.34
FGFR3-209ENST00000507588 ST6GAL2Q96JF0 529 aa12.94□□□□□ -0.34
FGFR3-209ENST00000507588 WFDC1Q9HC57 220 aa12.94□□□□□ -0.34
FGFR3-209ENST00000507588 A0A096LPF7 62 aa12.93□□□□□ -0.34
FGFR3-209ENST00000507588 DIRC3C9JPN6 131 aa12.93□□□□□ -0.34
FGFR3-209ENST00000507588 ACOT6Q3I5F7 207 aaPredicted RBP12.93□□□□□ -0.34
FGFR3-209ENST00000507588 Q6AWC8 147 aa12.93□□□□□ -0.34
FGFR3-209ENST00000507588 PQLC2Q6ZP29 291 aa12.93□□□□□ -0.34
FGFR3-209ENST00000507588 KRTAP1-5Q9BYS1 174 aa12.93□□□□□ -0.34
FGFR3-209ENST00000507588 A0A1W2PPQ1 181 aa12.92□□□□□ -0.34
FGFR3-209ENST00000507588 ZNF575Q86XF7 245 aa12.92□□□□□ -0.34
FGFR3-209ENST00000507588 ARL6IP6Q8N6S5 226 aa12.92□□□□□ -0.34
FGFR3-209ENST00000507588 OTORQ9NRC9 128 aa12.92□□□□□ -0.34
FGFR3-209ENST00000507588 MRPL16Q9NX20 251 aaKnown RBP12.92□□□□□ -0.34
FGFR3-209ENST00000507588 ALG5Q9Y673 324 aa12.92□□□□□ -0.34
FGFR3-209ENST00000507588 PTTG1O95997 202 aa12.91□□□□□ -0.34
FGFR3-209ENST00000507588 DNAH5Q8TE73 4624 aa12.9□□□□□ -0.34
FGFR3-209ENST00000507588 BTF3P20290 206 aaKnown RBP12.9□□□□□ -0.34
FGFR3-209ENST00000507588 RAB2AP61019 212 aa12.9□□□□□ -0.34
FGFR3-209ENST00000507588 FAM74A1Q5RGS3 127 aa12.9□□□□□ -0.34
FGFR3-209ENST00000507588 A0A1W2PPV4 95 aa12.89□□□□□ -0.35
FGFR3-209ENST00000507588 EIF3GO75821 320 aaKnown RBP eCLIP12.89□□□□□ -0.35
FGFR3-209ENST00000507588 MUC21Q5SSG8 566 aa12.89□□□□□ -0.35
FGFR3-209ENST00000507588 OR2G3Q8NGZ4 309 aa12.89□□□□□ -0.35
FGFR3-209ENST00000507588 CMTM2Q8TAZ6 248 aa12.89□□□□□ -0.35
FGFR3-209ENST00000507588 PRO0255Q9UI72 69 aa12.89□□□□□ -0.35
FGFR3-209ENST00000507588 ICOSQ9Y6W8 199 aa12.89□□□□□ -0.35
FGFR3-209ENST00000507588 PGPA6NDG6 321 aa12.88□□□□□ -0.35
FGFR3-209ENST00000507588 SLAQ13239 276 aa12.88□□□□□ -0.35
FGFR3-209ENST00000507588 TDRG1Q3Y452 100 aa12.88□□□□□ -0.35
FGFR3-209ENST00000507588 HYLS1Q96M11 299 aa12.88□□□□□ -0.35
FGFR3-209ENST00000507588 AQP10Q96PS8 301 aa12.88□□□□□ -0.35
FGFR3-209ENST00000507588 APOBP04114 4563 aaKnown RBP12.87□□□□□ -0.35
FGFR3-209ENST00000507588 TRGV11A0A075B6L2 103 aa12.87□□□□□ -0.35
FGFR3-209ENST00000507588 PAX4O43316 350 aa12.87□□□□□ -0.35
FGFR3-209ENST00000507588 FAM159AQ6UWV7 190 aa12.87□□□□□ -0.35
FGFR3-209ENST00000507588 OR10G4Q8NGN3 311 aa12.87□□□□□ -0.35
FGFR3-209ENST00000507588 OR10G9Q8NGN4 311 aa12.87□□□□□ -0.35
FGFR3-209ENST00000507588 OR10G7Q8NGN6 311 aa12.87□□□□□ -0.35
FGFR3-209ENST00000507588 PSMG3Q9BT73 122 aaPredicted RBP12.87□□□□□ -0.35
FGFR3-209ENST00000507588 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
FGFR3-209ENST00000507588 IGHV3-53P01767 116 aa12.86□□□□□ -0.35
FGFR3-209ENST00000507588 CDC34P49427 236 aaPredicted RBP12.86□□□□□ -0.35
FGFR3-209ENST00000507588 CRYBA4P53673 196 aa12.86□□□□□ -0.35
FGFR3-209ENST00000507588 FHL2Q14192 279 aa12.86□□□□□ -0.35
FGFR3-209ENST00000507588 GOLT1AQ6ZVE7 132 aa12.86□□□□□ -0.35
FGFR3-209ENST00000507588 RASL10AQ92737 203 aa12.86□□□□□ -0.35
FGFR3-209ENST00000507588 SPXQ9BT56 116 aa12.86□□□□□ -0.35
FGFR3-209ENST00000507588 RPH3ALQ9UNE2 315 aa12.86□□□□□ -0.35
FGFR3-209ENST00000507588 STAG3L2P0CL84 134 aa12.85□□□□□ -0.35
FGFR3-209ENST00000507588 STAG3L3P0CL85 134 aa12.85□□□□□ -0.35
FGFR3-209ENST00000507588 ARL14EPLP0DKL9 152 aa12.85□□□□□ -0.35
FGFR3-209ENST00000507588 TMEM183BQ1AE95 376 aa12.85□□□□□ -0.35
FGFR3-209ENST00000507588 TMEM183AQ8IXX5 376 aa12.85□□□□□ -0.35
FGFR3-209ENST00000507588 HHLA3Q9XRX5 114 aa12.85□□□□□ -0.35
FGFR3-209ENST00000507588 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
FGFR3-209ENST00000507588 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
FGFR3-209ENST00000507588 C16orf90A8MZG2 172 aa12.84□□□□□ -0.35
FGFR3-209ENST00000507588 HMGB3O15347 200 aaKnown RBP12.84□□□□□ -0.35
FGFR3-209ENST00000507588 IQCF2Q8IXL9 164 aa12.84□□□□□ -0.35
FGFR3-209ENST00000507588 HSD17B11Q8NBQ5 300 aa12.84□□□□□ -0.35
FGFR3-209ENST00000507588 SUN5Q8TC36 379 aa12.84□□□□□ -0.35
FGFR3-209ENST00000507588 ASB13Q8WXK3 278 aa12.84□□□□□ -0.35
FGFR3-209ENST00000507588 MED28Q9H204 178 aa12.84□□□□□ -0.35
FGFR3-209ENST00000507588 ABCA13Q86UQ4 5058 aa12.83□□□□□ -0.36
FGFR3-209ENST00000507588 TRAV8-1A0A0A6YYK1 113 aa12.83□□□□□ -0.36
FGFR3-209ENST00000507588 ATP6V0CP27449 155 aa12.83□□□□□ -0.36
FGFR3-209ENST00000507588 SERF2P84101 59 aa12.83□□□□□ -0.36
FGFR3-209ENST00000507588 MRPL23Q16540 153 aaKnown RBP12.83□□□□□ -0.36
FGFR3-209ENST00000507588 TVP23CQ96ET8 276 aa12.83□□□□□ -0.36
FGFR3-209ENST00000507588 C8orf49Q96NF6 230 aa12.83□□□□□ -0.36
FGFR3-209ENST00000507588 SIVA1O15304 175 aa12.82□□□□□ -0.36
FGFR3-209ENST00000507588 GIPP09681 153 aaPredicted RBP12.82□□□□□ -0.36
FGFR3-209ENST00000507588 GNG5P63218 68 aa12.82□□□□□ -0.36
FGFR3-209ENST00000507588 C5orf17Q8NAS9 161 aa12.82□□□□□ -0.36
FGFR3-209ENST00000507588 RAB24Q969Q5 203 aa12.82□□□□□ -0.36
FGFR3-209ENST00000507588 ZNF479Q96JC4 524 aa12.82□□□□□ -0.36
FGFR3-209ENST00000507588 TREM1Q9NP99 234 aa12.82□□□□□ -0.36
FGFR3-209ENST00000507588 NAGKQ9UJ70 344 aa12.82□□□□□ -0.36
FGFR3-209ENST00000507588 TRAV4A0A0B4J268 109 aa12.81□□□□□ -0.36
FGFR3-209ENST00000507588 TRGV4A0A0C4DH28 118 aa12.81□□□□□ -0.36
FGFR3-209ENST00000507588 IGHV3-16A0A0C4DH30 117 aa12.81□□□□□ -0.36
FGFR3-209ENST00000507588 F6UZH7 168 aa12.81□□□□□ -0.36
FGFR3-209ENST00000507588 NXPH4O95158 308 aa12.81□□□□□ -0.36
FGFR3-209ENST00000507588 MBP02144 154 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms