RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TCTEX1D1Q8N7M0 179 aa0.37□□□□□ -2.35
LSM6-205ENST00000507449 OR9Q1Q8NGQ5 310 aa0.37□□□□□ -2.35
LSM6-205ENST00000507449 SMR3AQ99954 134 aa0.37□□□□□ -2.35
LSM6-205ENST00000507449 DDA1Q9BW61 102 aa0.37□□□□□ -2.35
LSM6-205ENST00000507449 LOC107986453A0A1B0GWG9 222 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 A0A1W2PPB8 328 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 A0A1W2PRS3 328 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 KIR3DP1A8MWS1 328 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 SULT1C4O75897 302 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 RPL22P35268 128 aaKnown RBP0.36□□□□□ -2.35
LSM6-205ENST00000507449 SAMD13Q5VXD3 122 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 XAF1Q6GPH4 301 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 Q6ZS92 163 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 BRK1Q8WUW1 75 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 LINC00208Q96KT6 92 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 COMMD3Q9UBI1 195 aa0.36□□□□□ -2.35
LSM6-205ENST00000507449 A2MP01023 1474 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 NBDYA0A0U1RRE5 68 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 ARL5CA6NH57 179 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 CDC42EP2O14613 210 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 LY6G6CO95867 125 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 HBDP02042 147 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 GYPBP06028 91 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 SRP9P49458 86 aaKnown RBP0.35□□□□□ -2.35
LSM6-205ENST00000507449 GTF2A1P52655 376 aaPredicted RBP0.35□□□□□ -2.35
LSM6-205ENST00000507449 CAV3P56539 151 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 DNAJB13P59910 316 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 SNRPD3P62318 126 aaKnown RBP0.35□□□□□ -2.35
LSM6-205ENST00000507449 CCSMST1Q4G0I0 132 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 GLYATL3Q5SZD4 288 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 C10orf99Q6UWK7 81 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 DEFB132Q7Z7B7 95 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 NDUFAF1Q9Y375 327 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 ZDBF2Q9HCK1 2354 aa0.35□□□□□ -2.35
LSM6-205ENST00000507449 LOC101927531A0A1B0GV80 90 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 BBIP1A8MTZ0 92 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 EDF1O60869 148 aaKnown RBP0.34□□□□□ -2.36
LSM6-205ENST00000507449 SLC25A5P05141 298 aaKnown RBP0.34□□□□□ -2.36
LSM6-205ENST00000507449 SPINK7P58062 85 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 Q5XG85 94 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 C3orf62Q6ZUJ4 267 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 SMIM15Q7Z3B0 74 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 OR5A2Q8NGI9 324 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 SELENOSQ9BQE4 189 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 C19orf12Q9NSK7 152 aa0.34□□□□□ -2.36
LSM6-205ENST00000507449 MRPL36Q9P0J6 103 aaKnown RBP0.34□□□□□ -2.36
LSM6-205ENST00000507449 IGKCP01834 107 aa0.33□□□□□ -2.36
LSM6-205ENST00000507449 S100GP29377 79 aa0.33□□□□□ -2.36
LSM6-205ENST00000507449 FXYD3Q14802 87 aa0.33□□□□□ -2.36
LSM6-205ENST00000507449 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.33□□□□□ -2.36
LSM6-205ENST00000507449 TMEM35BQ8NCS4 154 aa0.33□□□□□ -2.36
LSM6-205ENST00000507449 OTOSQ8NHW6 89 aa0.33□□□□□ -2.36
LSM6-205ENST00000507449 MRPL35Q9NZE8 188 aaKnown RBP0.33□□□□□ -2.36
LSM6-205ENST00000507449 PLAC8Q9NZF1 115 aa0.33□□□□□ -2.36
LSM6-205ENST00000507449 JPT1Q9UK76 154 aa0.33□□□□□ -2.36
LSM6-205ENST00000507449 KIAA1549LQ6ZVL6 1849 aa0.33□□□□□ -2.36
LSM6-205ENST00000507449 TMEM189A5PLL7 270 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 IFITM5A6NNB3 132 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 H0YJX3 145 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 UQCRQO14949 82 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 IGF2P01344 180 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 NBEAP1P0C6P0 100 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 EVI2AP22794 236 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 B2MP61769 119 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 ZNF56Q15929 161 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 LYPD5Q6UWN5 251 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 C5orf56Q8N8D9 126 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 MUC5BQ9HC84 5762 aaPredicted RBP0.32□□□□□ -2.36
LSM6-205ENST00000507449 MED23Q9ULK4 1368 aa0.32□□□□□ -2.36
LSM6-205ENST00000507449 TCRAP04437 139 aa0.31□□□□□ -2.36
LSM6-205ENST00000507449 KDELR1P24390 212 aa0.31□□□□□ -2.36
LSM6-205ENST00000507449 ETV6P41212 452 aa0.31□□□□□ -2.36
LSM6-205ENST00000507449 RPS28P62857 69 aaKnown RBP0.31□□□□□ -2.36
LSM6-205ENST00000507449 ASB16-AS1Q495Z4 193 aa0.31□□□□□ -2.36
LSM6-205ENST00000507449 OR8J3Q8NGG0 315 aa0.31□□□□□ -2.36
LSM6-205ENST00000507449 TANC2Q9HCD6 1990 aa0.31□□□□□ -2.36
LSM6-205ENST00000507449 FER1L6Q2WGJ9 1857 aa0.31□□□□□ -2.36
LSM6-205ENST00000507449 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 IGHV1-24A0A0C4DH33 117 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 TMEM30CPA0ZSE6 113 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 IL7P13232 177 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 CKS2P33552 79 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 FXYD6P3P58550 94 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 RHOHQ15669 191 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 SMIM7Q9BQ49 75 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 GINS2Q9Y248 185 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 WDR97A6NE52 1622 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 NAV3Q8IVL0 2385 aa0.3□□□□□ -2.36
LSM6-205ENST00000507449 ANK1P16157 1881 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 GNG14A0A1W2PPG7 69 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 TSTD3H0UI37 97 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 J3KT08 172 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 TPST1O60507 370 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 MT-ND4LP03901 98 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 SDC4P31431 198 aa0.29□□□□□ -2.36
LSM6-205ENST00000507449 RPL37P61927 97 aaKnown RBP0.29□□□□□ -2.36
LSM6-205ENST00000507449 SKA2Q8WVK7 121 aaPredicted RBP0.29□□□□□ -2.36
LSM6-205ENST00000507449 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms