RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 C5orf51A6NDU8 294 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 SMIM9A6NGZ8 99 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 M0R3E3 92 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 RTL8CO15255 209 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 BCL2L11O43521 198 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 EIF3GO75821 320 aaKnown RBP eCLIP3.41□□□□□ -1.86
CDH9-203ENST00000505045 INSP01308 110 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 HBE1P02100 147 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 SMIM6P0DI80 62 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 CAMLGP49069 296 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 H2BFSP57053 126 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 TCTAP57738 103 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 RAB5BP61020 215 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 SELENOTP62341 195 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 ZNF345Q14585 488 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 RRN3P1Q2M238 152 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 VWC2Q2TAL6 325 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 SPATA31B1PQ5VZV4 182 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 TMEM88Q6PEY1 159 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 TMEM252Q8N6L7 170 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 RPL36ALQ969Q0 106 aaKnown RBP3.41□□□□□ -1.86
CDH9-203ENST00000505045 RPUSD4Q96CM3 377 aaKnown RBP3.41□□□□□ -1.86
CDH9-203ENST00000505045 C2orf50Q96LR7 162 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 GPR82Q96P67 336 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 TMEM208Q9BTX3 173 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 NDUFAF3Q9BU61 184 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 LYRM2Q9NU23 88 aaPredicted RBP3.41□□□□□ -1.86
CDH9-203ENST00000505045 WDR83OSQ9Y284 106 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 GOLT1BQ9Y3E0 138 aa3.41□□□□□ -1.86
CDH9-203ENST00000505045 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.86
CDH9-203ENST00000505045 TMEM189A5PLL7 270 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 J3KRW8 73 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 COX7A2P2O60397 106 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 PYYP10082 97 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 S100PP25815 95 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 SSTP61278 116 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 VAMP2P63027 116 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 PSG3Q16557 428 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 LRRC37A5PQ49AS3 106 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 GFI1BQ5VTD9 330 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 SAMD13Q5VXD3 122 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 LCN15Q6UWW0 184 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 Q6ZQT7 251 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 POM121L12Q8N7R1 296 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 THAP6Q8TBB0 222 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 RNASE8Q8TDE3 154 aaKnown RBP3.4□□□□□ -1.86
CDH9-203ENST00000505045 SAT2Q96F10 170 aaPredicted RBP3.4□□□□□ -1.86
CDH9-203ENST00000505045 TCEAL7Q9BRU2 100 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 OR51M1Q9H341 326 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 GSN-AS1Q9NRJ2 163 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 UQCC1Q9NVA1 299 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 ZNF586Q9NXT0 402 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 OR5AC2Q9NZP5 309 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 TNFSF18Q9UNG2 199 aa3.4□□□□□ -1.86
CDH9-203ENST00000505045 A0A087WWL8 130 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 C1orf196B1AJZ1 125 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 DUSP14O95147 198 aaKnown RBP3.4□□□□□ -1.87
CDH9-203ENST00000505045 NDUFB4O95168 129 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 DEFB130BP0DP73 79 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 DEFB130AP0DP74 79 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 HTN1P15515 57 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 FGF7P21781 194 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 SULT1A1P50225 295 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 DAD1P61803 113 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 RHOBP62745 196 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 BAXQ07812 192 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 PEA15Q15121 130 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 RNF212Q495C1 297 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 FAM74A1Q5RGS3 127 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 C10orf113Q5VZT2 155 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 CBLN2Q8IUK8 224 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 C15orf54Q8N8G6 183 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 RXFP4Q8TDU9 374 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 GGACTQ9BVM4 153 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 ZNF471Q9BX82 626 aaPredicted RBP3.4□□□□□ -1.87
CDH9-203ENST00000505045 SEC11CQ9BY50 192 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 NPCDR1Q9BY65 106 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 SLC39A9Q9NUM3 307 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 PXMP4Q9Y6I8 212 aa3.4□□□□□ -1.87
CDH9-203ENST00000505045 RNF222A6NCQ9 220 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 C5orf52A6NGY3 159 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 COLCA2A8K830 154 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 P0DMU3 169 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 FAM231AP0DMU4 169 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 FAM231CP0DMU5 169 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 CT45A10P0DMU9 189 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 ADCYAP1P18509 176 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 TSPOP30536 169 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 CDKN1BP46527 198 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 SNRPEP62304 92 aaKnown RBP3.39□□□□□ -1.87
CDH9-203ENST00000505045 ERCC8Q13216 396 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 CLINT1Q14677 625 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 PRR9Q5T870 116 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 Q6ZR54 194 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 BPIFA4PQ86YQ2 179 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 EXOC3-AS1Q8N2X6 119 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 OR5C1Q8NGR4 320 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 STOML3Q8TAV4 291 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 FAM167A-AS1Q96KT0 104 aa3.39□□□□□ -1.87
CDH9-203ENST00000505045 LINC01587Q99440 93 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms