RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ORM1P02763 201 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 CAMLGP49069 296 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 INPP1P49441 399 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 UBE2MP61081 183 aaKnown RBP4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 ARL16Q0P5N6 197 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 WFDC2Q14508 124 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 GUK1Q16774 197 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 MIC13Q5XKP0 118 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 FAM122CQ6P4D5 195 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 Q6ZRG5 221 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 SCXQ7RTU7 201 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 EXOC3-AS1Q8N2X6 119 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 ZFAND2AQ8N6M9 145 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 Q8TAT8 98 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 MRPL53Q96EL3 112 aaKnown RBP4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 SMIM8Q96KF7 97 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 FAM19A4Q96LR4 140 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 LINC00477Q96M19 166 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 SLC25A31Q9H0C2 315 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 AGPAT4-IT1Q9H0P7 198 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 TIMM9Q9Y5J7 89 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 TRBV19A0A075B6N1 114 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 IGHV3-16A0A0C4DH30 117 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 FNDC10F2Z333 226 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 NDUFB6O95139 128 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 PYYP10082 97 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 HIST1H1EP10412 219 aaKnown RBP4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 CRISP2P16562 243 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 OR10J3Q5JRS4 329 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 TMEM78Q5T7P6 136 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 TRIQKQ629K1 86 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 Q6ZSA8 131 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 NRARPQ7Z6K4 114 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 S100ZQ8WXG8 99 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 AAMDCQ9H7C9 122 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 DNAJC4Q9NNZ3 241 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 GSKIPQ9P0R6 139 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 NAGKQ9UJ70 344 aa4.58□□□□□ -1.68
NPIPB3-203ENST00000504841 SRRM2Q9UQ35 2752 aaKnown RBP4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 TRAV8-6A0A0B4J262 113 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 UBE2L5PA0A1B0GUS4 154 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 C9orf170A2RU37 121 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 IBA57-AS1B1ANH7 110 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 L7N2F9 121 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 TSC22D2O75157 780 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 ZNF253O75346 499 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 NDUFB4O95168 129 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 IL7P13232 177 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 BCAP31P51572 246 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 VAMP2P63027 116 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 RAB31Q13636 194 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 BAK1Q16611 211 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 TMEM183BQ1AE95 376 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 IAH1Q2TAA2 248 aaPredicted RBP4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 LINC01556Q5JQF7 62 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 TMEM183AQ8IXX5 376 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 OR4C5Q8NGB2 326 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 OR10G4Q8NGN3 311 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 OR1L4Q8NGR5 311 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 SDHCQ99643 169 aaPredicted RBP4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 CCDC32Q9BV29 185 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 PRELID1Q9Y255 219 aa4.57□□□□□ -1.68
NPIPB3-203ENST00000504841 TRAV4A0A0B4J268 109 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 CST7O76096 145 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 OXTP01178 125 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 IGLV2-8P01709 118 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 CAV2P51636 162 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 ZNF138P52744 262 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 TAS2R30P59541 319 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 BAXQ07812 192 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 ZNF846Q147U1 533 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 C4orf46Q504U0 113 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 C9orf47Q6ZRZ4 202 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 IQCF2Q8IXL9 164 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 PFDN5Q99471 154 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 TM2D2Q9BX73 214 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 GPN1Q9HCN4 374 aaPredicted RBP4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 SLC39A9Q9NUM3 307 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 ZNF492Q9P255 531 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 FLVCR2Q9UPI3 526 aa4.56□□□□□ -1.68
NPIPB3-203ENST00000504841 TRGV11A0A075B6L2 103 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 C7orf66A4D0T2 115 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 C5orf51A6NDU8 294 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 RBFOX3A6NFN3 312 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 MBPP02686 304 aaPredicted RBP4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 NMBP08949 121 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 KRTAP10-4P60372 401 aaPredicted RBP4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 FAM159AQ6UWV7 190 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 SH2D6Q7Z4S9 175 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 C12orf45Q8N5I9 185 aaPredicted RBP4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 BAALCQ8WXS3 180 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 RASL10AQ92737 203 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 GGACTQ9BVM4 153 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 UQCC1Q9NVA1 299 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 TMEM14CQ9P0S9 112 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 WDR83OSQ9Y284 106 aa4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 LSM5Q9Y4Y9 91 aaKnown RBP4.55□□□□□ -1.68
NPIPB3-203ENST00000504841 IGHV3-73A0A0B4J1V6 119 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms