RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 LEPP41159 167 aa8.92□□□□□ -0.98
POLR2J3-210ENST00000504677 CRIP1P50238 77 aa8.92□□□□□ -0.98
POLR2J3-210ENST00000504677 FAM3BP58499 235 aaPredicted RBP8.92□□□□□ -0.98
POLR2J3-210ENST00000504677 COX19Q49B96 90 aa8.92□□□□□ -0.98
POLR2J3-210ENST00000504677 APRG1Q8IVJ8 170 aa8.92□□□□□ -0.98
POLR2J3-210ENST00000504677 TMEM189A5PLL7 270 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 F6UB75 175 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 ZNF705DP0CH99 300 aaPredicted RBP8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 ZNF705BP0CI00 300 aaPredicted RBP8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 HLA-DRB4P13762 266 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 TSPOP30536 169 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 DEFB131AP59861 70 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 FAM110AQ9BQ89 295 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 MCRIP2Q9BUT9 160 aaKnown RBP8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 ZNF747Q9BV97 191 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 SRD5A3Q9H8P0 318 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 MAP6D1Q9H9H5 199 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 ZNF256Q9Y2P7 627 aaPredicted RBP8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 HLA-DRB4X5D2U9 266 aa8.91□□□□□ -0.98
POLR2J3-210ENST00000504677 TRAV21A0A0B4J279 112 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 IZUMO1RA6ND01 250 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 A8MTW9 85 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 CA1P00915 261 aaPredicted RBP8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 RPS10P46783 165 aaKnown RBP8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 C9orf66Q5T8R8 295 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 RASL11AQ6T310 242 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 ATP5L2Q7Z4Y8 100 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 ZFAND2AQ8N6M9 145 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 TMEM158Q8WZ71 300 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 NEU1Q99519 415 aa8.9□□□□□ -0.98
POLR2J3-210ENST00000504677 SETD2Q9BYW2 2564 aaPredicted RBP8.9□□□□□ -0.99
POLR2J3-210ENST00000504677 HIGD1CA8MV81 97 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 C1orf196B1AJZ1 125 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 KLLNB2CW77 178 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 OR11H12B2RN74 326 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 GPX1P07203 203 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 ZNF80P51504 273 aaPredicted RBP8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 FOXA3P55318 350 aaPredicted RBP8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 TCL1AP56279 114 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 DEFB1P60022 68 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 GDF5OSQ5U4N7 250 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 CLUHP3Q96NS8 147 aa8.89□□□□□ -0.99
POLR2J3-210ENST00000504677 ORM1P02763 201 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 MT-ND6P03923 174 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 CD33P20138 364 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 RAB5BP61020 215 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 WDR73Q6P4I2 378 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 SHISA2Q6UWI4 295 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 PRIMA1Q86XR5 153 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 NUP35Q8NFH5 326 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 BORCS7Q96B45 105 aa8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 TMA7Q9Y2S6 64 aaKnown RBP8.88□□□□□ -0.99
POLR2J3-210ENST00000504677 A0A1B0GW15 77 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 H3BMM0 161 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 CDKN1BP46527 198 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 BEAN1Q3B7T3 259 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 ACTL10Q5JWF8 245 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 C12orf54Q6X4T0 127 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 C3orf56Q8N813 242 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 GTSF1Q8WW33 167 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 WNK1Q9H4A3 2382 aa8.87□□□□□ -0.99
POLR2J3-210ENST00000504677 C7orf71A4D174 169 aa8.86□□□□□ -0.99
POLR2J3-210ENST00000504677 KNCNA6PVL3 124 aa8.86□□□□□ -0.99
POLR2J3-210ENST00000504677 AMBPP02760 352 aa8.86□□□□□ -0.99
POLR2J3-210ENST00000504677 S100A8P05109 93 aa8.86□□□□□ -0.99
POLR2J3-210ENST00000504677 PRR9Q5T870 116 aa8.86□□□□□ -0.99
POLR2J3-210ENST00000504677 AMTNQ6UX39 209 aa8.86□□□□□ -0.99
POLR2J3-210ENST00000504677 GNB1LQ9BYB4 327 aa8.86□□□□□ -0.99
POLR2J3-210ENST00000504677 JMJD1CQ15652 2540 aa8.86□□□□□ -0.99
POLR2J3-210ENST00000504677 A0A1B0GUT8 65 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 F2Z2F3 143 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 HLA-DQA1P01909 254 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 RNASE4P34096 147 aaKnown RBP8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 CTRLP40313 264 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 HBBP68871 147 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 RIGQ13278 110 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 STHQ8IWL8 128 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 FER1L6-AS1Q8NA97 138 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 WFDC9Q8NEX5 89 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 KCNS1Q96KK3 526 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 PGLYRP4Q96LB8 373 aa8.85□□□□□ -0.99
POLR2J3-210ENST00000504677 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 IGKV3D-20A0A0C4DH25 116 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 J3KRW8 73 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 IGLC6P0CF74 106 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 MED14OSP0DP75 135 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 GZMBP10144 247 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 KRTAP21-3Q3LHN1 58 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 MRPL54Q6P161 138 aaKnown RBP8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 C20orf144Q9BQM9 153 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 TRAPPC1Q9Y5R8 145 aa8.84□□□□□ -0.99
POLR2J3-210ENST00000504677 A0A1B0GXF2 115 aa8.83□□□□□ -1
POLR2J3-210ENST00000504677 SNURFLB1AK76 121 aa8.83□□□□□ -1
POLR2J3-210ENST00000504677 WIPF1O43516 503 aa8.83□□□□□ -1
POLR2J3-210ENST00000504677 IGKV3-20P01619 116 aa8.83□□□□□ -1
POLR2J3-210ENST00000504677 TRGC2P03986 189 aa8.83□□□□□ -1
POLR2J3-210ENST00000504677 NUTF2P61970 127 aaKnown RBP8.83□□□□□ -1
POLR2J3-210ENST00000504677 SPINK13Q1W4C9 94 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms