RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 FLI1Q01543 452 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-208ENST00000504489 TEX261Q6UWH6 196 aa8.59□□□□□ -1.03
PDLIM5-208ENST00000504489 TMEM75Q8N9X5 138 aa8.59□□□□□ -1.03
PDLIM5-208ENST00000504489 TXNDC17Q9BRA2 123 aa8.59□□□□□ -1.03
PDLIM5-208ENST00000504489 GNG13Q9P2W3 67 aa8.59□□□□□ -1.03
PDLIM5-208ENST00000504489 PSG8Q9UQ74 426 aa8.59□□□□□ -1.03
PDLIM5-208ENST00000504489 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 H7BYZ3 331 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 J3KRW8 73 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 ZNF324O75467 553 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 IFNA1P01562 189 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 TAGLN2P37802 199 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 TAS2R60P59551 318 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 RRN3P1Q2M238 152 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 ZNF680Q8NEM1 530 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 TVP23CQ96ET8 276 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 LINC01587Q99440 93 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 NIPSNAP3BQ9BS92 247 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 KLF12Q9Y4X4 402 aa8.58□□□□□ -1.04
PDLIM5-208ENST00000504489 C11orf94C9JXX5 98 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 BTN1A1Q13410 526 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 SAPCD1Q5SSQ6 148 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 PRR9Q5T870 116 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 PRNTQ86SH4 94 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 LINC00479Q96M42 142 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 NDFIP1Q9BT67 221 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 TREM1Q9NP99 234 aa8.57□□□□□ -1.04
PDLIM5-208ENST00000504489 TRAV34A0A0B4J273 112 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 TRBV6-1A0A0K0K1D8 114 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 LOC102723971A0A1B0GUV8 181 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 TMEM189A5PLL7 270 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 ZNF705GA8MUZ8 300 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 DEFB4AO15263 64 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 S100A9P06702 114 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 BCL2P10415 239 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 TMEM183BQ1AE95 376 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 Q6AWC8 147 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 C2CD4CQ8TF44 421 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 FMC1Q96HJ9 113 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 LINC00467Q9BRT7 94 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 VAX2Q9UIW0 290 aa8.56□□□□□ -1.04
PDLIM5-208ENST00000504489 EREGO14944 169 aa8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 AZU1P20160 251 aa8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 AKR1C3P42330 323 aa8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 MEF2BQ02080 365 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 ZNF493Q6ZR52 646 aa8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 Q86TA4 180 aa8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 C11orf52Q96A22 123 aa8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 ZFP30Q9Y2G7 519 aa8.55□□□□□ -1.04
PDLIM5-208ENST00000504489 PDE6DO43924 150 aa8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 PRM2P04554 102 aa8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 UBE2G1P62253 170 aa8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 SMUG1Q53HV7 270 aa8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 COX8CQ7Z4L0 72 aa8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 TMEM263Q8WUH6 116 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 C16orf74Q96GX8 76 aa8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 MUC4Q99102 2169 aa8.54□□□□□ -1.04
PDLIM5-208ENST00000504489 IGHV1OR15-1A0A075B7D0 117 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 TRAV21A0A0B4J279 112 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 PLAC8L1A1L4L8 177 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 RBFOX3A6NFN3 312 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 RGS13O14921 159 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 LTAP01374 205 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 HTN1P15515 57 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 ANXA2RQ3ZCQ2 193 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 Q6ZQT7 251 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 EIF4E3Q8N5X7 224 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 RNASE8Q8TDE3 154 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-208ENST00000504489 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 TEX48A0A1B0GUV7 120 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 CXorf65A6NEN9 183 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 NDUFS6O75380 124 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 GCGP01275 180 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 SPART-AS1P0CW21 52 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 ZNF80P51504 273 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 TDRG1Q3Y452 100 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 ZNF506Q5JVG8 444 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 TMEM183AQ8IXX5 376 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 C11orf45Q8TAV5 145 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 DKK2Q9UBU2 259 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 DNAH7Q8WXX0 4024 aa8.52□□□□□ -1.05
PDLIM5-208ENST00000504489 PFN1P07737 140 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-208ENST00000504489 EMP1P54849 157 aa8.51□□□□□ -1.05
PDLIM5-208ENST00000504489 FAM159AQ6UWV7 190 aa8.51□□□□□ -1.05
PDLIM5-208ENST00000504489 FAM210AQ96ND0 272 aa8.51□□□□□ -1.05
PDLIM5-208ENST00000504489 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
PDLIM5-208ENST00000504489 TIMM8BQ9Y5J9 83 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-208ENST00000504489 CBY3A6NI87 242 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 LYRM9A8MSI8 78 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 C3orf84H3BNL1 204 aa8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 RPL35P42766 123 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-208ENST00000504489 NANOS2P60321 138 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 467.3 ms