RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 DLX6P56179 175 aa13.89□□□□□ -0.19
POLR2J3-209ENST00000504157 SRSF2Q01130 221 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-209ENST00000504157 AJUBAQ96IF1 538 aa13.89□□□□□ -0.19
POLR2J3-209ENST00000504157 ARFGEF3Q5TH69 2177 aa13.89□□□□□ -0.19
POLR2J3-209ENST00000504157 DCHS1Q96JQ0 3298 aa13.89□□□□□ -0.19
POLR2J3-209ENST00000504157 LGALS1P09382 135 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-209ENST00000504157 EGR2P11161 476 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-209ENST00000504157 SRSF8Q9BRL6 282 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-209ENST00000504157 M0R3E3 92 aa13.88□□□□□ -0.19
POLR2J3-209ENST00000504157 NDUFA3O95167 84 aa13.88□□□□□ -0.19
POLR2J3-209ENST00000504157 Q6Q795 121 aa13.88□□□□□ -0.19
POLR2J3-209ENST00000504157 ANKRD29Q8N6D5 301 aa13.88□□□□□ -0.19
POLR2J3-209ENST00000504157 ENSAO43768 121 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 PRB4P10163 310 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 SEM1Q6ZVN7 128 aa13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 MSRB1Q9NZV6 116 aa13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 TCL1BO95988 128 aa13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 IGHG4P01861 327 aa13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 CLEC3BP05452 202 aa13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 IFITM1P13164 125 aa13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 ANXA2RQ3ZCQ2 193 aa13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 ZNF474Q6S9Z5 364 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 ZNF575Q86XF7 245 aa13.87□□□□□ -0.19
POLR2J3-209ENST00000504157 TRAV12-1A0A0B4J245 112 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 ZNF491Q8N8L2 437 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 AAMDCQ9H7C9 122 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 F8VRH5 84 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 H7C1H1 209 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 M0QXV9 152 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 SNCGO76070 127 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 TTC32Q5I0X7 151 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 TMEM78Q5T7P6 136 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 IGFL2Q6UWQ7 119 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 PPP1R27Q86WC6 154 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 NUP37Q8NFH4 326 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 HIF1ANQ9NWT6 349 aa13.86□□□□□ -0.19
POLR2J3-209ENST00000504157 CD7P09564 240 aa13.85□□□□□ -0.19
POLR2J3-209ENST00000504157 CD40P25942 277 aa13.85□□□□□ -0.19
POLR2J3-209ENST00000504157 SFTA2Q6UW10 78 aa13.85□□□□□ -0.19
POLR2J3-209ENST00000504157 RNF125Q96EQ8 232 aa13.85□□□□□ -0.19
POLR2J3-209ENST00000504157 PLXNB1O43157 2135 aa13.85□□□□□ -0.19
POLR2J3-209ENST00000504157 APELAP0DMC3 54 aa13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 GATA1P15976 413 aaPredicted RBP13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 LAGE3Q14657 143 aa13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 TMEM155Q4W5P6 130 aa13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 PSMG3-AS1Q96PY0 264 aa13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 CELSR3Q9NYQ7 3312 aa13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 TRAV17A0A0B4J275 112 aa13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 NDUFB3O43676 98 aa13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 CNTFRP26992 372 aa13.84□□□□□ -0.19
POLR2J3-209ENST00000504157 IGHV3-72A0A0B4J1Y9 119 aa13.83□□□□□ -0.2
POLR2J3-209ENST00000504157 TRAV4A0A0B4J268 109 aa13.83□□□□□ -0.2
POLR2J3-209ENST00000504157 K7EIM0 57 aa13.83□□□□□ -0.2
POLR2J3-209ENST00000504157 IGHV1-8P0DP01 117 aa13.83□□□□□ -0.2
POLR2J3-209ENST00000504157 OR11H6Q8NGC7 330 aa13.83□□□□□ -0.2
POLR2J3-209ENST00000504157 PRR25Q96S07 402 aa13.83□□□□□ -0.2
POLR2J3-209ENST00000504157 LOXP28300 417 aaPredicted RBP13.83□□□□□ -0.2
POLR2J3-209ENST00000504157 ARL3P36405 182 aa13.83□□□□□ -0.2
POLR2J3-209ENST00000504157 INTS1Q8N201 2190 aaKnown RBP13.82□□□□□ -0.2
POLR2J3-209ENST00000504157 CCL8P80075 99 aa13.82□□□□□ -0.2
POLR2J3-209ENST00000504157 TMEM178BH3BS89 294 aa13.82□□□□□ -0.2
POLR2J3-209ENST00000504157 DTX2Q86UW9 622 aa13.82□□□□□ -0.2
POLR2J3-209ENST00000504157 NDUFA11Q86Y39 141 aa13.82□□□□□ -0.2
POLR2J3-209ENST00000504157 RAXQ9Y2V3 346 aa13.82□□□□□ -0.2
POLR2J3-209ENST00000504157 C17orf100A8MU93 164 aa13.81□□□□□ -0.2
POLR2J3-209ENST00000504157 H3BVH4 76 aa13.81□□□□□ -0.2
POLR2J3-209ENST00000504157 SCGB1C2P0DMR2 95 aa13.81□□□□□ -0.2
POLR2J3-209ENST00000504157 PRTN3P24158 256 aa13.81□□□□□ -0.2
POLR2J3-209ENST00000504157 ZNF80P51504 273 aaPredicted RBP13.81□□□□□ -0.2
POLR2J3-209ENST00000504157 CRLF1O75462 422 aa13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 PRR30Q53SZ7 412 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 FDCSPQ8NFU4 85 aa13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 RNF5Q99942 180 aa13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 RAB1BQ9H0U4 201 aa13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 ASPMQ8IZT6 3477 aa13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 SRSF9Q13242 221 aaKnown RBP eCLIP13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 KAAG1Q9UBP8 84 aa13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 SPTBN2O15020 2390 aa13.8□□□□□ -0.2
POLR2J3-209ENST00000504157 FAM159AQ6UWV7 190 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 ABCA1O95477 2261 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 TRAV8-2A0A0B4J237 113 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 IGHV1-3A0A0C4DH29 117 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 ZNF815PA8K554 130 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 IGLV1-47P01700 117 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 EFNA4P52798 201 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 LYPD2Q6UXB3 125 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 PRADC1Q9BSG0 188 aa13.79□□□□□ -0.2
POLR2J3-209ENST00000504157 IGKV2-40A0A087WW87 121 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-209ENST00000504157 IGKV2D-40P01614 121 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-209ENST00000504157 NRACQ8N912 160 aa13.78□□□□□ -0.2
POLR2J3-209ENST00000504157 CTSZQ9UBR2 303 aa13.78□□□□□ -0.2
POLR2J3-209ENST00000504157 COX6B1P14854 86 aa13.78□□□□□ -0.2
POLR2J3-209ENST00000504157 CADP27708 2225 aa13.77□□□□□ -0.2
POLR2J3-209ENST00000504157 SLC25A20O43772 301 aa13.77□□□□□ -0.21
POLR2J3-209ENST00000504157 SCGB1D4Q6XE38 83 aa13.77□□□□□ -0.21
POLR2J3-209ENST00000504157 PLEKHB2Q96CS7 222 aa13.77□□□□□ -0.21
POLR2J3-209ENST00000504157 PIEZO1Q92508 2521 aa13.77□□□□□ -0.21
POLR2J3-209ENST00000504157 ORM1P02763 201 aa13.76□□□□□ -0.21
POLR2J3-209ENST00000504157 IL17RELQ6ZVW7 336 aa13.76□□□□□ -0.21
POLR2J3-209ENST00000504157 NEXN-AS1Q8NBZ9 246 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms