RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 KIR2DL5AQ8N109 375 aa16.17■□□□□ 0.18
UBE2D3-216ENST00000503742 SCGB1D1O95968 90 aa16.16■□□□□ 0.18
UBE2D3-216ENST00000503742 RPL11P62913 178 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-216ENST00000503742 PRR31Q5SQ13 230 aa16.16■□□□□ 0.18
UBE2D3-216ENST00000503742 LYZL1Q6UWQ5 148 aa16.16■□□□□ 0.18
UBE2D3-216ENST00000503742 OVOL1O14753 267 aa16.15■□□□□ 0.18
UBE2D3-216ENST00000503742 LINC01559Q495D7 138 aa16.15■□□□□ 0.18
UBE2D3-216ENST00000503742 LENEPQ9Y5L5 61 aa16.15■□□□□ 0.18
UBE2D3-216ENST00000503742 IGHV4OR15-8A0A075B7B6 117 aa16.15■□□□□ 0.18
UBE2D3-216ENST00000503742 A0A087WW49 117 aa16.15■□□□□ 0.18
UBE2D3-216ENST00000503742 FAM181BA6NEQ2 426 aa16.15■□□□□ 0.18
UBE2D3-216ENST00000503742 IGLC6P0CF74 106 aa16.15■□□□□ 0.18
UBE2D3-216ENST00000503742 MRPL52Q86TS9 123 aaKnown RBP16.15■□□□□ 0.18
UBE2D3-216ENST00000503742 ITPR2Q14571 2701 aa16.14■□□□□ 0.18
UBE2D3-216ENST00000503742 LGALS9O00182 355 aa16.14■□□□□ 0.17
UBE2D3-216ENST00000503742 CTRLP40313 264 aa16.14■□□□□ 0.17
UBE2D3-216ENST00000503742 HIST1H1AQ02539 215 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-216ENST00000503742 KCNS1Q96KK3 526 aa16.14■□□□□ 0.17
UBE2D3-216ENST00000503742 LINC00477Q96M19 166 aa16.14■□□□□ 0.17
UBE2D3-216ENST00000503742 TPPP3Q9BW30 176 aa16.14■□□□□ 0.17
UBE2D3-216ENST00000503742 LOC102724200A0A096LPH7 203 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 KLHDC1Q8N7A1 406 aa16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 BORCS7Q96B45 105 aa16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 UNC79Q9P2D8 2635 aa16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 ANK3Q12955 4377 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 ORM1P02763 201 aa16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 ZNF705DP0CH99 300 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 ZNF705BP0CI00 300 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 ZNF493Q6ZR52 646 aa16.13■□□□□ 0.17
UBE2D3-216ENST00000503742 DNAJC9-AS1A6NH13 148 aa16.12■□□□□ 0.17
UBE2D3-216ENST00000503742 DCANP1Q8TF63 244 aa16.12■□□□□ 0.17
UBE2D3-216ENST00000503742 IGKV3-7A0A075B6H7 116 aa16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 GPX1P07203 203 aa16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 FER1L6-AS1Q8NA97 138 aa16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 OR10J6PQ8NGY7 276 aa16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 C11orf21Q9P2W6 132 aa16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 SELENOKQ9Y6D0 94 aa16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 HOXD3P31249 432 aaPredicted RBP16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 SYNJ2BPP57105 145 aa16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 SAMD13Q5VXD3 122 aa16.11■□□□□ 0.17
UBE2D3-216ENST00000503742 SONP18583 2426 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-216ENST00000503742 IGKV3D-20A0A0C4DH25 116 aa16.1■□□□□ 0.17
UBE2D3-216ENST00000503742 SRD5A1P18405 259 aa16.1■□□□□ 0.17
UBE2D3-216ENST00000503742 Q6ZSV7 163 aa16.1■□□□□ 0.17
UBE2D3-216ENST00000503742 Q6ZWC4 215 aa16.1■□□□□ 0.17
UBE2D3-216ENST00000503742 SAMD10Q9BYL1 202 aa16.1■□□□□ 0.17
UBE2D3-216ENST00000503742 YAE1D1Q9NRH1 226 aa16.1■□□□□ 0.17
UBE2D3-216ENST00000503742 DEFB1P60022 68 aa16.09■□□□□ 0.17
UBE2D3-216ENST00000503742 OR8A1Q8NGG7 326 aa16.09■□□□□ 0.17
UBE2D3-216ENST00000503742 FAM19A4Q96LR4 140 aa16.09■□□□□ 0.17
UBE2D3-216ENST00000503742 CNFNQ9BYD5 112 aa16.09■□□□□ 0.17
UBE2D3-216ENST00000503742 ESM1Q9NQ30 184 aa16.09■□□□□ 0.17
UBE2D3-216ENST00000503742 ZNF324O75467 553 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-216ENST00000503742 TCTEX1D4Q5JR98 221 aa16.09■□□□□ 0.17
UBE2D3-216ENST00000503742 C18orf65Q6ZTR6 163 aa16.09■□□□□ 0.17
UBE2D3-216ENST00000503742 NUTF2P61970 127 aaKnown RBP16.08■□□□□ 0.16
UBE2D3-216ENST00000503742 PRR9Q5T870 116 aa16.08■□□□□ 0.16
UBE2D3-216ENST00000503742 TEX43Q6ZNM6 134 aa16.08■□□□□ 0.16
UBE2D3-216ENST00000503742 ZFAND2AQ8N6M9 145 aa16.08■□□□□ 0.16
UBE2D3-216ENST00000503742 M0R143 59 aa16.07■□□□□ 0.16
UBE2D3-216ENST00000503742 ID1P41134 155 aa16.07■□□□□ 0.16
UBE2D3-216ENST00000503742 C20orf144Q9BQM9 153 aa16.07■□□□□ 0.16
UBE2D3-216ENST00000503742 AMTP48728 403 aa16.07■□□□□ 0.16
UBE2D3-216ENST00000503742 URB1-AS1Q96HZ7 61 aa16.07■□□□□ 0.16
UBE2D3-216ENST00000503742 MS4A6AQ9H2W1 248 aa16.07■□□□□ 0.16
UBE2D3-216ENST00000503742 TRBV7-9A0A0J9YWB2 115 aa16.06■□□□□ 0.16
UBE2D3-216ENST00000503742 C2orf70A6NJV1 201 aa16.06■□□□□ 0.16
UBE2D3-216ENST00000503742 F6UB75 175 aa16.06■□□□□ 0.16
UBE2D3-216ENST00000503742 GCN1Q92616 2671 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-216ENST00000503742 Q6ZQT7 251 aa16.06■□□□□ 0.16
UBE2D3-216ENST00000503742 APRG1Q8IVJ8 170 aa16.06■□□□□ 0.16
UBE2D3-216ENST00000503742 MUC21A0A0G2JKD1 596 aa16.05■□□□□ 0.16
UBE2D3-216ENST00000503742 MUC21A0A140T8X8 626 aa16.05■□□□□ 0.16
UBE2D3-216ENST00000503742 PMCHP20382 165 aa16.05■□□□□ 0.16
UBE2D3-216ENST00000503742 MUC21Q5SSG8 566 aa16.05■□□□□ 0.16
UBE2D3-216ENST00000503742 FAM104BQ5XKR9 115 aa16.05■□□□□ 0.16
UBE2D3-216ENST00000503742 NIT1Q86X76 327 aa16.05■□□□□ 0.16
UBE2D3-216ENST00000503742 C4orf3Q8WVX3 66 aa16.05■□□□□ 0.16
UBE2D3-216ENST00000503742 EREGO14944 169 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 RAB4AP20338 218 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 NTF3P20783 257 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 DEFB136Q30KP8 78 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 WFDC3Q8IUB2 231 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 MYO9AB2RTY4 2548 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 CD33P20138 364 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 FAM19A2Q8N3H0 131 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 SNHG12Q9BXW3 62 aa16.04■□□□□ 0.16
UBE2D3-216ENST00000503742 ACANP16112 2415 aa16.03■□□□□ 0.16
UBE2D3-216ENST00000503742 K7EQG2 157 aa16.03■□□□□ 0.16
UBE2D3-216ENST00000503742 SLURP1P55000 103 aa16.03■□□□□ 0.16
UBE2D3-216ENST00000503742 TWIST1Q15672 202 aa16.03■□□□□ 0.16
UBE2D3-216ENST00000503742 ADAMTSL5Q6ZMM2 481 aa16.03■□□□□ 0.16
UBE2D3-216ENST00000503742 RNF114Q9Y508 228 aa16.03■□□□□ 0.16
UBE2D3-216ENST00000503742 LINC01619G3V211 115 aa16.02■□□□□ 0.16
UBE2D3-216ENST00000503742 RNASEKQ6P5S7 137 aaKnown RBP16.02■□□□□ 0.16
UBE2D3-216ENST00000503742 U3KQK5 164 aa16.02■□□□□ 0.16
UBE2D3-216ENST00000503742 HSBP1O75506 76 aa16.02■□□□□ 0.15
UBE2D3-216ENST00000503742 DMRTA1Q5VZB9 504 aa16.02■□□□□ 0.15
UBE2D3-216ENST00000503742 TRAV21A0A0B4J279 112 aa16.01■□□□□ 0.15
UBE2D3-216ENST00000503742 TCAPO15273 167 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms