RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 A0A1W2PNU3 283 aaPredicted RBP12.83□□□□□ -0.36
HMGXB3-202ENST00000503427 DEFB131AP59861 70 aa12.83□□□□□ -0.36
HMGXB3-202ENST00000503427 PMVKQ15126 192 aa12.83□□□□□ -0.36
HMGXB3-202ENST00000503427 TRAV13-1A0A0B4J241 112 aa12.83□□□□□ -0.36
HMGXB3-202ENST00000503427 K7EN84 100 aa12.83□□□□□ -0.36
HMGXB3-202ENST00000503427 C6orf226Q5I0X4 101 aa12.83□□□□□ -0.36
HMGXB3-202ENST00000503427 Q96MF0 132 aa12.83□□□□□ -0.36
HMGXB3-202ENST00000503427 UBE2E2Q96LR5 201 aa12.82□□□□□ -0.36
HMGXB3-202ENST00000503427 NDUFA4O00483 81 aa12.82□□□□□ -0.36
HMGXB3-202ENST00000503427 PHLDA1Q8WV24 401 aaPredicted RBP12.82□□□□□ -0.36
HMGXB3-202ENST00000503427 DOCK10Q96BY6 2186 aa12.82□□□□□ -0.36
HMGXB3-202ENST00000503427 LTAP01374 205 aa12.82□□□□□ -0.36
HMGXB3-202ENST00000503427 DIAPH2-AS1Q14236 149 aa12.82□□□□□ -0.36
HMGXB3-202ENST00000503427 C9JAW5 83 aa12.82□□□□□ -0.36
HMGXB3-202ENST00000503427 WIPF2Q8TF74 440 aaPredicted RBP12.81□□□□□ -0.36
HMGXB3-202ENST00000503427 TRBV20-1A0A075B6N2 111 aa12.81□□□□□ -0.36
HMGXB3-202ENST00000503427 RPL35AP18077 110 aaKnown RBP12.81□□□□□ -0.36
HMGXB3-202ENST00000503427 CR1LQ2VPA4 569 aa12.81□□□□□ -0.36
HMGXB3-202ENST00000503427 COA6Q5JTJ3 125 aaKnown RBP12.81□□□□□ -0.36
HMGXB3-202ENST00000503427 C11orf68Q9H3H3 251 aaKnown RBP12.81□□□□□ -0.36
HMGXB3-202ENST00000503427 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 LHBP01229 141 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 I3L3M4 83 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 NPYP01303 97 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 GAGE1Q13065 139 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 ZNF491Q8N8L2 437 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 SDHAF1A6NFY7 115 aa12.8□□□□□ -0.36
HMGXB3-202ENST00000503427 SPINK13Q1W4C9 94 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 VGLL1Q99990 258 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 FGF23Q9GZV9 251 aaPredicted RBP12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 CTSZQ9UBR2 303 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 C22orf46C9J442 243 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 ANXA2RQ3ZCQ2 193 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 MAPK1IP1LQ8NDC0 245 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 NPSP0C0P6 89 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 GRNP28799 593 aaKnown RBP12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 SMIM2Q9BVW6 85 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 OBSL1O75147 1896 aa12.79□□□□□ -0.36
HMGXB3-202ENST00000503427 OTOGLQ3ZCN5 2332 aa12.78□□□□□ -0.36
HMGXB3-202ENST00000503427 IGLC7A0M8Q6 106 aa12.78□□□□□ -0.36
HMGXB3-202ENST00000503427 SPINK8P0C7L1 97 aa12.78□□□□□ -0.36
HMGXB3-202ENST00000503427 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
HMGXB3-202ENST00000503427 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
HMGXB3-202ENST00000503427 KLF2Q9Y5W3 355 aaPredicted RBP12.78□□□□□ -0.36
HMGXB3-202ENST00000503427 HLA-DRB4P13762 266 aa12.78□□□□□ -0.36
HMGXB3-202ENST00000503427 HLA-DRB4X5D2U9 266 aa12.78□□□□□ -0.36
HMGXB3-202ENST00000503427 BVES-AS1Q5T3Y7 98 aa12.77□□□□□ -0.36
HMGXB3-202ENST00000503427 MRPL35Q9NZE8 188 aaKnown RBP12.77□□□□□ -0.36
HMGXB3-202ENST00000503427 TRAV26-2A0A0B4J265 109 aa12.77□□□□□ -0.36
HMGXB3-202ENST00000503427 F8VRH5 84 aa12.77□□□□□ -0.36
HMGXB3-202ENST00000503427 TAL2Q16559 108 aa12.77□□□□□ -0.37
HMGXB3-202ENST00000503427 SS18Q15532 418 aa12.77□□□□□ -0.37
HMGXB3-202ENST00000503427 KNCNA6PVL3 124 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 LINC01619G3V211 115 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 SIVA1O15304 175 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 DNAJC30Q96LL9 226 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 K7EP34 96 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 SHANK1Q9Y566 2161 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 C20orf78Q9BR46 151 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 CDKN1BP46527 198 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 LAMTOR3Q9UHA4 124 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 ZNF106Q9H2Y7 1883 aaKnown RBP12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 NCOR2Q9Y618 2525 aa12.76□□□□□ -0.37
HMGXB3-202ENST00000503427 F8W1H4 67 aa12.75□□□□□ -0.37
HMGXB3-202ENST00000503427 KLK9Q9UKQ9 250 aa12.75□□□□□ -0.37
HMGXB3-202ENST00000503427 PLA2G2EQ9NZK7 142 aa12.75□□□□□ -0.37
HMGXB3-202ENST00000503427 HIST1H4AP62805 103 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-202ENST00000503427 ASPHD1Q5U4P2 390 aa12.75□□□□□ -0.37
HMGXB3-202ENST00000503427 H3BUA1 57 aa12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 K7EP13 123 aa12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 NDUFS7O75251 213 aa12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 ARFGEF3Q5TH69 2177 aa12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 COL4A3Q01955 1670 aa12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 ZNF747Q9BV97 191 aa12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 NOTCH3Q9UM47 2321 aa12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 SRSF2Q01130 221 aaKnown RBP12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
HMGXB3-202ENST00000503427 ELANEP08246 267 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 KIR2DL5BA0A0G2JN68 375 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 KIR2DL5BA0A0G2JPC4 375 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 SEM1Q6ZVN7 128 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 KIR2DL5AQ8N109 375 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 A0A1W2PPM0 123 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 HOXB4P17483 251 aaPredicted RBP12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 CEND1Q8N111 149 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 PPDPFLQ8WWR9 84 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 C17orf77Q96MU5 243 aa12.73□□□□□ -0.37
HMGXB3-202ENST00000503427 SPAG8Q99932 426 aaPredicted RBP12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 Q71RC1 249 aaPredicted RBP12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 DEFB130BP0DP73 79 aa12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 DEFB130AP0DP74 79 aa12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 ETDBQ3ZM63 59 aa12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 FAM120AOSQ5T036 256 aa12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 IGHV7-4-1A0A0J9YVY3 117 aa12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 H3BMM0 161 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms