RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 OR5C1Q8NGR4 320 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 FAM167A-AS1Q96KT0 104 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 ATG101Q9BSB4 218 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 NMES1Q9C002 83 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 SMCO4Q9NRQ5 59 aa11.35□□□□□ -0.59
SCLT1-204ENST00000503215 DYNC1H1Q14204 4646 aaKnown RBP11.34□□□□□ -0.59
SCLT1-204ENST00000503215 GAGE12BA1L429 117 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 ZNF253O75346 499 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 GAGE7O76087 117 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 GAGE12FP0CL80 117 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 GAGE12GP0CL81 117 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 GAGE12IP0CL82 117 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 HOXA5P20719 270 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 LEPP41159 167 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 ZNRF2Q8NHG8 242 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 ODF3Q96PU9 254 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 OR51M1Q9H341 326 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 LINC00588Q9Y4M8 146 aa11.34□□□□□ -0.59
SCLT1-204ENST00000503215 TAAR5O14804 337 aa11.33□□□□□ -0.6
SCLT1-204ENST00000503215 OR5I1Q13606 314 aa11.33□□□□□ -0.6
SCLT1-204ENST00000503215 PEA15Q15121 130 aa11.33□□□□□ -0.6
SCLT1-204ENST00000503215 C1orf134Q5TEV5 83 aa11.33□□□□□ -0.6
SCLT1-204ENST00000503215 Q6ZQT7 251 aa11.33□□□□□ -0.6
SCLT1-204ENST00000503215 TIMM9Q9Y5J7 89 aa11.33□□□□□ -0.6
SCLT1-204ENST00000503215 DNAH11Q96DT5 4516 aa11.33□□□□□ -0.6
SCLT1-204ENST00000503215 TRAV26-1A0A087WT03 109 aa11.32□□□□□ -0.6
SCLT1-204ENST00000503215 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
SCLT1-204ENST00000503215 C1orf196B1AJZ1 125 aa11.32□□□□□ -0.6
SCLT1-204ENST00000503215 E5RGE8 158 aa11.32□□□□□ -0.6
SCLT1-204ENST00000503215 MPDU1O75352 247 aa11.32□□□□□ -0.6
SCLT1-204ENST00000503215 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
SCLT1-204ENST00000503215 Q6ZTI0 123 aa11.32□□□□□ -0.6
SCLT1-204ENST00000503215 MRPL53Q96EL3 112 aaKnown RBP11.32□□□□□ -0.6
SCLT1-204ENST00000503215 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
SCLT1-204ENST00000503215 VGLL1Q99990 258 aa11.32□□□□□ -0.6
SCLT1-204ENST00000503215 A0A0J9YY99 117 aa11.31□□□□□ -0.6
SCLT1-204ENST00000503215 C7orf71A4D174 169 aa11.31□□□□□ -0.6
SCLT1-204ENST00000503215 C5orf52A6NGY3 159 aa11.31□□□□□ -0.6
SCLT1-204ENST00000503215 ZNF324O75467 553 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-204ENST00000503215 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
SCLT1-204ENST00000503215 ICAM4Q14773 271 aa11.31□□□□□ -0.6
SCLT1-204ENST00000503215 PPP1R1CQ8WVI7 109 aa11.31□□□□□ -0.6
SCLT1-204ENST00000503215 SLC25A31Q9H0C2 315 aa11.31□□□□□ -0.6
SCLT1-204ENST00000503215 GSN-AS1Q9NRJ2 163 aa11.31□□□□□ -0.6
SCLT1-204ENST00000503215 KLLNB2CW77 178 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 MT-ND4LP03901 98 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 PET100P0DJ07 73 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 RNASE4P34096 147 aaKnown RBP11.3□□□□□ -0.6
SCLT1-204ENST00000503215 SSTP61278 116 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 PRR9Q5T870 116 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 C11orf72Q8NBR9 251 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 PYGO2Q9BRQ0 406 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 WDR61Q9GZS3 305 aaKnown RBP11.3□□□□□ -0.6
SCLT1-204ENST00000503215 TMPRSS5Q9H3S3 457 aa11.3□□□□□ -0.6
SCLT1-204ENST00000503215 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 EIF3GO75821 320 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCLT1-204ENST00000503215 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
SCLT1-204ENST00000503215 OR10J4P0C629 311 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 NBEAP1P0C6P0 100 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 ADCYAP1P18509 176 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 TNP2Q05952 138 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 PDE6HQ13956 83 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 SSX7Q7RTT5 188 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 ZFAND2AQ8N6M9 145 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 FXYD5Q96DB9 178 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 LINC00477Q96M19 166 aa11.29□□□□□ -0.6
SCLT1-204ENST00000503215 COLCA2A8K830 154 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 CCL18P55774 89 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 DAZ2Q13117 558 aaKnown RBP11.28□□□□□ -0.6
SCLT1-204ENST00000503215 FAM74A1Q5RGS3 127 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 C9orf47Q6ZRZ4 202 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 GNPNAT1Q96EK6 184 aaPredicted RBP11.28□□□□□ -0.6
SCLT1-204ENST00000503215 ZNF503Q96F45 646 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 AQP10Q96PS8 301 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 TP53TG3Q9ULZ0 132 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 KLF12Q9Y4X4 402 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 SOHLH1Q5JUK2 328 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 SMDT1Q9H4I9 107 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
SCLT1-204ENST00000503215 MED14OSP0DP75 135 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 CRISP2P16562 243 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 ESRGQ1W209 222 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 Q8TAT8 98 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 KRTAP1-5Q9BYS1 174 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 SMIM3Q9BZL3 60 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 AAMDCQ9H7C9 122 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 FUT9Q9Y231 359 aa11.27□□□□□ -0.61
SCLT1-204ENST00000503215 MUC4Q99102 2169 aa11.26□□□□□ -0.61
SCLT1-204ENST00000503215 GPX1P07203 203 aa11.26□□□□□ -0.61
SCLT1-204ENST00000503215 CBLN2Q8IUK8 224 aa11.26□□□□□ -0.61
SCLT1-204ENST00000503215 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
SCLT1-204ENST00000503215 ATP5SQ99766 215 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms