RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 ZNF56Q15929 161 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 ABCA11PQ4W5N1 156 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 KCTD18Q6PI47 426 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-203ENST00000502998 LINC00305Q7Z4B0 112 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 LYZL2Q7Z4W2 148 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 C5orf38Q86SI9 138 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 RPP25LQ8N5L8 163 aaKnown RBP5.11□□□□□ -1.59
CLCN3-203ENST00000502998 ZNF525Q8N782 197 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 C10orf105Q8TEF2 133 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 PLPPR2Q96GM1 343 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 TRGV9Q99603 122 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 UPK3BQ9BT76 320 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 TMEM14AQ9Y6G1 99 aa5.11□□□□□ -1.59
CLCN3-203ENST00000502998 PLAC8L1A1L4L8 177 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 C17orf100A8MU93 164 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 H3BMM0 161 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 SYNGR2O43760 224 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 SPINT3P49223 89 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 ATP5EP56381 51 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-203ENST00000502998 HERVK_113P61574 105 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 ZNF816Q0VGE8 651 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-203ENST00000502998 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-203ENST00000502998 LINC00173Q6ZV60 143 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 SEM1Q6ZVN7 128 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 ODF3L1Q8IXM7 274 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 C11orf45Q8TAV5 145 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 TAF15Q92804 592 aaKnown RBP eCLIP5.1□□□□□ -1.59
CLCN3-203ENST00000502998 UBE2WQ96B02 151 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 Q96M85 177 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 ARHGEF17Q96PE2 2063 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-203ENST00000502998 SCN3AQ9NY46 2000 aa5.1□□□□□ -1.59
CLCN3-203ENST00000502998 ESPL1Q14674 2120 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 TRBV25-1A0A075B6N4 114 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 TMEM14DPA8MWL7 114 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 C16orf97H3BN30 126 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 UPK2O00526 184 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 TCRAP04437 139 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 PIRTP0C851 137 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 ERCC8Q13216 396 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 TMEM155Q4W5P6 130 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 C1orf140Q5VVS0 124 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 SLC48A1Q6P1K1 146 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 MARCH3Q86UD3 253 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 LYPD6Q86Y78 171 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 RPRMLQ8N4K4 120 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 SSMEM1Q8WWF3 244 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 RITA1Q96K30 269 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 LIME1Q9H400 295 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 STARD5Q9NSY2 213 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 U3KQE9 123 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 PCNX1Q96RV3 2341 aa5.09□□□□□ -1.59
CLCN3-203ENST00000502998 ADGRG4Q8IZF6 3080 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 DOCK11Q5JSL3 2073 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 HIVEP1P15822 2718 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 TRBV20OR9-2A0A075B6H5 130 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 TRBV7-3A0A075B6L6 115 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 IGHV1-58A0A0C4DH39 117 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 LOC101059948A0A1B0GTJ6 334 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 UBE2L5PA0A1B0GUS4 154 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 LYRM9A8MSI8 78 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 HMGN4O00479 90 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 PAX4O43316 350 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 LOXL3P58215 753 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 CFHR3Q02985 330 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 RPL18Q07020 188 aaKnown RBP5.08□□□□□ -1.6
CLCN3-203ENST00000502998 SLC22A24Q8N4F4 322 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 CELSR1Q9NYQ6 3014 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 OTOGQ6ZRI0 2925 aa5.08□□□□□ -1.6
CLCN3-203ENST00000502998 DIDO1Q9BTC0 2240 aaKnown RBP5.07□□□□□ -1.6
CLCN3-203ENST00000502998 LOC107984156A0A0G2JMH3 177 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 C19orf71A6NCJ1 209 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 PRR32B1ATL7 298 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 H3BVH4 76 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 SPRY2O43597 315 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 FOXS1O43638 330 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 NXPH3O95157 252 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 EPPINO95925 133 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 IFI6P09912 130 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 FRMD6-AS1P0C7T7 363 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 CCL1P22362 96 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 MYCNOSP40205 109 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 PCBD1P61457 104 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 ATP1A1-AS1Q5TC04 95 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 HIST2H2BDQ6DRA6 164 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 PLXDC1Q8IUK5 500 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 ARL17AQ8IVW1 177 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 NTN5Q8WTR8 489 aaPredicted RBP5.07□□□□□ -1.6
CLCN3-203ENST00000502998 EEF1AKMT3Q96AZ1 226 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 ZNF799Q96GE5 643 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 HIST1H4GQ99525 98 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 SLC25A22Q9H936 323 aa5.07□□□□□ -1.6
CLCN3-203ENST00000502998 NF1P21359 2839 aa5.06□□□□□ -1.6
CLCN3-203ENST00000502998 POLEQ07864 2286 aa5.06□□□□□ -1.6
CLCN3-203ENST00000502998 A0A1B0GXF2 115 aa5.06□□□□□ -1.6
CLCN3-203ENST00000502998 MGST3O14880 152 aa5.06□□□□□ -1.6
CLCN3-203ENST00000502998 SPRY3O43610 288 aa5.06□□□□□ -1.6
CLCN3-203ENST00000502998 SS18L1O75177 396 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms