RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 A0A1B0GXF2 115 aa5.8□□□□□ -1.48
PDGFC-203ENST00000502773 CTSGP08311 255 aa5.8□□□□□ -1.48
PDGFC-203ENST00000502773 ZNF138P52744 262 aa5.8□□□□□ -1.48
PDGFC-203ENST00000502773 HERVK_113P61574 105 aa5.8□□□□□ -1.48
PDGFC-203ENST00000502773 GATD1Q8NB37 220 aa5.8□□□□□ -1.48
PDGFC-203ENST00000502773 RANBP2P49792 3224 aaKnown RBP5.8□□□□□ -1.48
PDGFC-203ENST00000502773 A8MWV9 139 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 ATP6V0E1O15342 81 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 ATP5LO75964 103 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 CLEC19AQ6UXS0 136 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 EXOC3-AS1Q8N2X6 119 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 VGLL1Q99990 258 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 MRPL36Q9P0J6 103 aaKnown RBP5.79□□□□□ -1.48
PDGFC-203ENST00000502773 CUL9Q8IWT3 2517 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 APC2O95996 2303 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 SH2D7A6NKC9 451 aaPredicted RBP5.79□□□□□ -1.48
PDGFC-203ENST00000502773 F8W1H4 67 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 IGF1P05019 195 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 MORN5Q5VZ52 161 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 WFDC3Q8IUB2 231 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 C5orf56Q8N8D9 126 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 PRELID3AQ96N28 172 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 PRR25Q96S07 402 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 FAM110AQ9BQ89 295 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 F5H768 121 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 ZFP36P26651 326 aaKnown RBP5.79□□□□□ -1.48
PDGFC-203ENST00000502773 SPANXA1Q9NS26 97 aa5.79□□□□□ -1.48
PDGFC-203ENST00000502773 CKS2P33552 79 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 ZNF493Q6ZR52 646 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 LINC00479Q96M42 142 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 C20orf78Q9BR46 151 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 DOPEY2Q9Y3R5 2298 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 TRAV21A0A0B4J279 112 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 K7EMI3 77 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 K7EMT4 169 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 IGHV4-39P01824 125 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 TWIST1Q15672 202 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 TP73-AS1Q9UF72 201 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 SMPXQ9UHP9 88 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 PRR14LQ5THK1 2151 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 S100A4P26447 101 aaKnown RBP5.78□□□□□ -1.48
PDGFC-203ENST00000502773 LRRC75A-AS1Q8N1F1 130 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 C18orf15Q96N68 181 aa5.78□□□□□ -1.48
PDGFC-203ENST00000502773 SYS1-DBNDD2H3BUS1 97 aa5.77□□□□□ -1.48
PDGFC-203ENST00000502773 LY6HO94772 140 aa5.77□□□□□ -1.48
PDGFC-203ENST00000502773 MT-ATP8P03928 68 aa5.77□□□□□ -1.48
PDGFC-203ENST00000502773 ERG28Q9UKR5 140 aa5.77□□□□□ -1.48
PDGFC-203ENST00000502773 BUB3O43684 328 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 SH2D1AO60880 128 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 IGHG2P01859 326 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 FAM159AQ6UWV7 190 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 ARFGEF3Q5TH69 2177 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 TRAV40A0A0B4J280 105 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 H3BTX0 84 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 DUSP14O95147 198 aaKnown RBP5.77□□□□□ -1.49
PDGFC-203ENST00000502773 KLF17Q5JT82 389 aaPredicted RBP5.77□□□□□ -1.49
PDGFC-203ENST00000502773 PTH2Q96A98 100 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 RAX2Q96IS3 184 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 ABCA1O95477 2261 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 MED14OSP0DP75 135 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 SNRPD3P62318 126 aaKnown RBP5.77□□□□□ -1.49
PDGFC-203ENST00000502773 RPL11P62913 178 aaKnown RBP5.77□□□□□ -1.49
PDGFC-203ENST00000502773 GAGE2AQ6NT46 116 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 RCHY1Q96PM5 261 aa5.77□□□□□ -1.49
PDGFC-203ENST00000502773 TRAV8-4A0A0B4J246 113 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 K7ERJ3 54 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 CD24P25063 80 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 LEPP41159 167 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 FAM104BQ5XKR9 115 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 GVINP1Q7Z2Y8 2422 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 OR9G4Q8NGQ1 327 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 A6NDX4 124 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 J3KT08 172 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 ELANEP08246 267 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 CTRLP40313 264 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 SPANXN1Q5VSR9 72 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 C9orf47Q6ZRZ4 202 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 DUX5Q96PT3 197 aa5.76□□□□□ -1.49
PDGFC-203ENST00000502773 DAZ1Q9NQZ3 744 aaKnown RBP5.76□□□□□ -1.49
PDGFC-203ENST00000502773 ZFHX2Q9C0A1 2572 aaPredicted RBP5.76□□□□□ -1.49
PDGFC-203ENST00000502773 MUC6Q6W4X9 2439 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 VWC2LB2RUY7 222 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 MRPS12O15235 138 aaKnown RBP5.75□□□□□ -1.49
PDGFC-203ENST00000502773 ASPHD1Q5U4P2 390 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 EBLN2Q6P2I7 272 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 MYOZ3Q8TDC0 251 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 SPTA1P02549 2419 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 TET2Q6N021 2002 aaPredicted RBP5.75□□□□□ -1.49
PDGFC-203ENST00000502773 PTPRQQ9UMZ3 2332 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 HBDP02042 147 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 APOHP02749 345 aaPredicted RBP5.75□□□□□ -1.49
PDGFC-203ENST00000502773 ASIPP42127 132 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 CMC4P56277 68 aaPredicted RBP5.75□□□□□ -1.49
PDGFC-203ENST00000502773 LYZL1Q6UWQ5 148 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 CEP250Q9BV73 2442 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 H3BUX3 64 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 GLMPQ8WWB7 406 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 DLX4Q92988 240 aaPredicted RBP5.75□□□□□ -1.49
PDGFC-203ENST00000502773 TMEM160Q9NX00 188 aa5.75□□□□□ -1.49
PDGFC-203ENST00000502773 PPDPFLQ8WWR9 84 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms