RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 SS18Q15532 418 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 RNASE13Q5GAN3 156 aaKnown RBP2.65□□□□□ -1.99
SUB1-202ENST00000502453 LINC01006Q8NI28 216 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 C10orf105Q8TEF2 133 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 SCRT1Q9BWW7 348 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 FAM72CH0Y354 149 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 GNGT2O14610 69 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 NDUFB3O43676 98 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 ZNF678Q5SXM1 525 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 FAM72AQ5TYM5 149 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 FAM72DQ6L9T8 149 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 SOSTDC1Q6X4U4 206 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 Q6ZQT7 251 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 SH2D6Q7Z4S9 175 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 FAM72BQ86X60 149 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 MYOZ3Q8TDC0 251 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 ZFHX3Q15911 3703 aa2.65□□□□□ -1.99
SUB1-202ENST00000502453 CASP8AP2Q9UKL3 1982 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 MRC1P22897 1456 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 TRGV3P03979 118 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 FGF12P61328 243 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 CCL20P78556 96 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 ADIRFQ15847 76 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 SBSPONQ8IVN8 264 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 AMN1Q8IY45 258 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 C18orf32Q8TCD1 76 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 POLEQ07864 2286 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 TET2Q6N021 2002 aaPredicted RBP2.64□□□□□ -1.99
SUB1-202ENST00000502453 HEATR5AQ86XA9 2040 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 COL3A1P02461 1466 aaPredicted RBP2.64□□□□□ -1.99
SUB1-202ENST00000502453 BMPR1BO00238 502 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 SOD1P00441 154 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 IGHV3-13P01766 116 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 IGKV1-16P04430 117 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 KISS1Q15726 138 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 C9orf47Q6ZRZ4 202 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 C16orf74Q96GX8 76 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 ANKRD12Q6UB98 2062 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 DDX60Q8IY21 1712 aaKnown RBP2.64□□□□□ -1.99
SUB1-202ENST00000502453 COL4A5P29400 1685 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 TRBV27A0A0K0K1C4 114 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 SYS1-DBNDD2H3BUS1 97 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 K7EM74 188 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 TSPEAR-AS2P59090 65 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 RPL18Q07020 188 aaKnown RBP2.64□□□□□ -1.99
SUB1-202ENST00000502453 ETDBQ3ZM63 59 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 C18orf65Q6ZTR6 163 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 Q8N377 158 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 FGF13Q92913 245 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 SLC35B3Q9H1N7 401 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 VPS13AQ96RL7 3174 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 C5orf42Q9H799 3197 aa2.64□□□□□ -1.99
SUB1-202ENST00000502453 LYRM1O43325 122 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 NUPR1O60356 82 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 ZNF737O75373 536 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 IGLV2-11P01706 119 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 GYPAP02724 150 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 NMSQ5H8A3 153 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 TMEM242Q9NWH2 141 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 KCPQ6ZWJ8 1503 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 PCSK5Q92824 1860 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 IGHV7-4-1A0A0J9YVY3 117 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 CREBL2O60519 120 aaPredicted RBP2.63□□□□□ -1.99
SUB1-202ENST00000502453 SNCGO76070 127 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 GYPBP06028 91 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 CGB3P0DN86 165 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 CGB7P0DN87 165 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 TPT1P13693 172 aaKnown RBP2.63□□□□□ -1.99
SUB1-202ENST00000502453 SNRPFP62306 86 aaKnown RBP2.63□□□□□ -1.99
SUB1-202ENST00000502453 MORN4Q8NDC4 146 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 TNFRSF19Q9NS68 423 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 ZFP92A6NM28 416 aa2.63□□□□□ -1.99
SUB1-202ENST00000502453 RNASE4P34096 147 aaKnown RBP2.63□□□□□ -1.99
SUB1-202ENST00000502453 C14orf178Q8N769 122 aaPredicted RBP2.63□□□□□ -1.99
SUB1-202ENST00000502453 LOC100996750A0A140TA64 210 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 MDFIC2A0A1B0GVS7 189 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 TLX1NBP0CAT3 122 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 FAUP35544 74 aaKnown RBP2.62□□□□□ -1.99
SUB1-202ENST00000502453 RPL27AP46776 148 aaKnown RBP2.62□□□□□ -1.99
SUB1-202ENST00000502453 KRTAP10-2P60368 255 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 ZNF345Q14585 488 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 MRPL51Q4U2R6 128 aaKnown RBP2.62□□□□□ -1.99
SUB1-202ENST00000502453 CD177Q8N6Q3 437 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 SVILO95425 2214 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 IGLV11-55A0A075B6I3 123 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 H3BUT2 72 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 SLC25A16P16260 332 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 MIC13Q5XKP0 118 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 Q8N7P7 452 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 CIRBP-AS1Q8TBR5 109 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 LITAFQ99732 161 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 LY6G6DO95868 133 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 IGKV1D-33P01593 117 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 IGKV1-33P01594 117 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 COX6A1P12074 109 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 CRIP3Q6Q6R5 217 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 DEFB107AQ8IZN7 70 aa2.62□□□□□ -1.99
SUB1-202ENST00000502453 RAB37Q96AX2 223 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms