RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 PRADC1Q9BSG0 188 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 CDIP1Q9H305 208 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 CGB3P0DN86 165 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 CGB7P0DN87 165 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 PPP1R27Q86WC6 154 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 RNF182Q8N6D2 247 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 LINC00312Q9Y6C7 94 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 IGKV1-17P01599 117 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 FAM27E3Q08E93 113 aa8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 COLQQ9Y215 455 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC12-223ENST00000497597 LAGE3Q14657 143 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 CTSZQ9UBR2 303 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 MYMXA0A1B0GTQ4 84 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 CCDC179H3BU77 68 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 ANKRD29Q8N6D5 301 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 PRR25Q96S07 402 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 ERG28Q9UKR5 140 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 ASH1LQ9NR48 2969 aaKnown RBP8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 LYNX1G3V0Z9 82 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 NTN3O00634 580 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 LYNX1P0DP58 116 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 ZNF833PQ6ZTB9 187 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 SHANK2-AS3Q9BTD1 123 aa8.32□□□□□ -1.08
TRAPPC12-223ENST00000497597 TTC28Q96AY4 2481 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 PRSS2P07478 247 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 SRSF6Q13247 344 aaKnown RBP8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 TRBV7-9A0A0J9YWB2 115 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 FABP5P3A8MUU1 101 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 LAMTOR5O43504 91 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 GLRXP35754 106 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 LYRM7Q5U5X0 104 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 ZNF688P0C7X2 276 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 SIGLEC9Q9Y336 463 aa8.31□□□□□ -1.08
TRAPPC12-223ENST00000497597 GAGE12JA6NER3 117 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 F5H697 171 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 GAGE7O76087 117 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 GAGE12FP0CL80 117 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 GAGE12GP0CL81 117 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 GAGE12IP0CL82 117 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 SMCPP49901 116 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 RPL11P62913 178 aaKnown RBP8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 GAGE4Q13068 117 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 CUBNO60494 3623 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 TRAV2A0A0B4J234 112 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 TCL1BO95988 128 aa8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 TRPT1Q86TN4 253 aaKnown RBP8.3□□□□□ -1.08
TRAPPC12-223ENST00000497597 NACAE9PAV3 2078 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 IL17RELQ6ZVW7 336 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 TEN1Q86WV5 123 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 H7C1H1 209 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 TM4SF5O14894 197 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 TSPAN13O95857 204 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 DLX6P56179 175 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 NPC2P61916 151 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 MORN3Q6PF18 240 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 ZNF491Q8N8L2 437 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 IGLV2-23P01705 113 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 LGALS1P09382 135 aaKnown RBP8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 CFAP126Q5VTH2 177 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 FAM159AQ6UWV7 190 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 ZNF493Q6ZR52 646 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 OR11H6Q8NGC7 330 aa8.29□□□□□ -1.08
TRAPPC12-223ENST00000497597 SPG11Q96JI7 2443 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 A0A087WX48 190 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 TRAV4A0A0B4J268 109 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 PRAC2D3DTV9 90 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 SRSF1Q07955 248 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 CARD19Q96LW7 228 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 ZNF71Q9NQZ8 489 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 PRO0461Q9UI25 63 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 F8VRH5 84 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 Q8N8P6 123 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 FDCSPQ8NFU4 85 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 SLC25A15Q9Y619 301 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 TNRC6BQ9UPQ9 1833 aaKnown RBP8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 SLC25A20O43772 301 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 PLNP26678 52 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 Q6ZQT7 251 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 C14orf178Q8N769 122 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 MDS2Q8NDY4 140 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 CFHR4Q92496 578 aa8.28□□□□□ -1.08
TRAPPC12-223ENST00000497597 MEIG1Q5JSS6 88 aa8.27□□□□□ -1.09
TRAPPC12-223ENST00000497597 RNF185Q96GF1 192 aa8.27□□□□□ -1.09
TRAPPC12-223ENST00000497597 CITED1Q99966 193 aa8.27□□□□□ -1.09
TRAPPC12-223ENST00000497597 ARRDC1-AS1Q9H2J1 176 aa8.27□□□□□ -1.09
TRAPPC12-223ENST00000497597 H3BRN7 92 aa8.27□□□□□ -1.09
TRAPPC12-223ENST00000497597 HERVK_113P61574 105 aa8.27□□□□□ -1.09
TRAPPC12-223ENST00000497597 DYNAPQ8N1N2 210 aa8.27□□□□□ -1.09
TRAPPC12-223ENST00000497597 TCF15Q12870 199 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 C5orf64Q2M2E5 130 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 GFRALQ6UXV0 394 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 C15orf53Q8NAA6 179 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 AJUBAQ96IF1 538 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 LHBP01229 141 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 MFAP4P55083 255 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 ECSCRQ19T08 205 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms