RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 NEU1Q99519 415 aa14.41□□□□□ -0.1
SCAMP3-209ENST00000497470 B9D2Q9BPU9 175 aa14.41□□□□□ -0.1
SCAMP3-209ENST00000497470 ZNF324O75467 553 aaPredicted RBP14.4□□□□□ -0.1
SCAMP3-209ENST00000497470 SRSF3P84103 164 aaKnown RBP14.4□□□□□ -0.1
SCAMP3-209ENST00000497470 SOHLH1Q5JUK2 328 aa14.4□□□□□ -0.1
SCAMP3-209ENST00000497470 ZNF705AQ6ZN79 300 aaPredicted RBP14.4□□□□□ -0.1
SCAMP3-209ENST00000497470 RNF183Q96D59 192 aa14.4□□□□□ -0.1
SCAMP3-209ENST00000497470 DERL1Q9BUN8 251 aa14.4□□□□□ -0.1
SCAMP3-209ENST00000497470 TRAV21A0A0B4J279 112 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 SMIM9A6NGZ8 99 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 C9JQL5 133 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 H7BYZ3 331 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 M0R2Z0 102 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 NHLRC4P0CG21 123 aaPredicted RBP14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 CENPWQ5EE01 88 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 GFI1BQ5VTD9 330 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 COMMD7Q86VX2 200 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 SMIM7Q9BQ49 75 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 TM2D3Q9BRN9 247 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 GOLT1BQ9Y3E0 138 aa14.39□□□□□ -0.11
SCAMP3-209ENST00000497470 DNAH3Q8TD57 4116 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 TRBV20OR9-2A0A075B6H5 130 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 FABP5P3A8MUU1 101 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 ZNF727A8MUV8 499 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 PFN1P07737 140 aaKnown RBP14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 ZNF674Q2M3X9 581 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 TDRG1Q3Y452 100 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 PYGO2Q9BRQ0 406 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 NIPSNAP3BQ9BS92 247 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 XCL2Q9UBD3 114 aa14.38□□□□□ -0.11
SCAMP3-209ENST00000497470 IGLV2-8P01709 118 aa14.37□□□□□ -0.11
SCAMP3-209ENST00000497470 SGK494Q96LW2 274 aa14.37□□□□□ -0.11
SCAMP3-209ENST00000497470 RCHY1Q96PM5 261 aa14.37□□□□□ -0.11
SCAMP3-209ENST00000497470 FAM162BQ5T6X4 162 aa14.36□□□□□ -0.11
SCAMP3-209ENST00000497470 C1orf158Q8N1D5 194 aa14.36□□□□□ -0.11
SCAMP3-209ENST00000497470 SPATA25Q9BR10 227 aa14.36□□□□□ -0.11
SCAMP3-209ENST00000497470 TP53TG3Q9ULZ0 132 aa14.36□□□□□ -0.11
SCAMP3-209ENST00000497470 TMEM218A2RU14 115 aa14.35□□□□□ -0.11
SCAMP3-209ENST00000497470 SPRY2O43597 315 aa14.35□□□□□ -0.11
SCAMP3-209ENST00000497470 GCGP01275 180 aa14.35□□□□□ -0.11
SCAMP3-209ENST00000497470 TMEM241Q24JQ0 296 aa14.35□□□□□ -0.11
SCAMP3-209ENST00000497470 SBSPONQ8IVN8 264 aa14.35□□□□□ -0.11
SCAMP3-209ENST00000497470 ZC2HC1AQ96GY0 325 aa14.35□□□□□ -0.11
SCAMP3-209ENST00000497470 KCNS1Q96KK3 526 aa14.35□□□□□ -0.11
SCAMP3-209ENST00000497470 C8orf49Q96NF6 230 aa14.35□□□□□ -0.11
SCAMP3-209ENST00000497470 SFTA3P0C7M3 94 aa14.34□□□□□ -0.11
SCAMP3-209ENST00000497470 PRB4P10163 310 aaPredicted RBP14.34□□□□□ -0.11
SCAMP3-209ENST00000497470 RNASE4P34096 147 aaKnown RBP14.34□□□□□ -0.11
SCAMP3-209ENST00000497470 PNRC1Q12796 327 aaPredicted RBP14.34□□□□□ -0.11
SCAMP3-209ENST00000497470 ANXA2RQ3ZCQ2 193 aa14.34□□□□□ -0.11
SCAMP3-209ENST00000497470 PRR9Q5T870 116 aa14.34□□□□□ -0.11
SCAMP3-209ENST00000497470 SEC11CQ9BY50 192 aa14.34□□□□□ -0.11
SCAMP3-209ENST00000497470 NAT8Q9UHE5 227 aa14.34□□□□□ -0.11
SCAMP3-209ENST00000497470 TRAV12-2A0A075B6T6 113 aa14.33□□□□□ -0.12
SCAMP3-209ENST00000497470 CXCL1P09341 107 aa14.33□□□□□ -0.12
SCAMP3-209ENST00000497470 FXYD7P58549 80 aa14.33□□□□□ -0.12
SCAMP3-209ENST00000497470 BTN1A1Q13410 526 aa14.33□□□□□ -0.12
SCAMP3-209ENST00000497470 ZNF493Q6ZR52 646 aa14.33□□□□□ -0.12
SCAMP3-209ENST00000497470 FAM231DQ6ZW35 169 aa14.33□□□□□ -0.12
SCAMP3-209ENST00000497470 OCC1Q8TAD7 63 aa14.33□□□□□ -0.12
SCAMP3-209ENST00000497470 TRAV12-3A0A0B4J271 114 aa14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 MIFP14174 115 aa14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 CRIP1P50238 77 aa14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 ZNF80P51504 273 aaPredicted RBP14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 KIR3DS1Q14943 382 aa14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 LINC01551Q86U37 167 aa14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 OVOL2Q9BRP0 275 aa14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 ZMAT4Q9H898 229 aa14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 SDF2L1Q9HCN8 221 aa14.32□□□□□ -0.12
SCAMP3-209ENST00000497470 IGHV1OR15-1A0A075B7D0 117 aa14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 C19orf71A6NCJ1 209 aa14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 RBMY1A1P0DJD3 496 aaKnown RBP14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 RBMY1CP0DJD4 496 aa14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 CEBPGP53567 150 aa14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 RBMY1FQ15415 496 aaKnown RBP14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 DEFB135Q30KP9 77 aa14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 DNLZQ5SXM8 178 aa14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 C10orf91Q5T1B1 145 aa14.31□□□□□ -0.12
SCAMP3-209ENST00000497470 TMEM189A5PLL7 270 aa14.3□□□□□ -0.12
SCAMP3-209ENST00000497470 LINC01559Q495D7 138 aa14.3□□□□□ -0.12
SCAMP3-209ENST00000497470 IBA57Q5T440 356 aaKnown RBP14.3□□□□□ -0.12
SCAMP3-209ENST00000497470 FAM159AQ6UWV7 190 aa14.3□□□□□ -0.12
SCAMP3-209ENST00000497470 LINC01587Q99440 93 aa14.3□□□□□ -0.12
SCAMP3-209ENST00000497470 TMEM208Q9BTX3 173 aa14.3□□□□□ -0.12
SCAMP3-209ENST00000497470 KRBOX1C9JBD0 128 aa14.29□□□□□ -0.12
SCAMP3-209ENST00000497470 SH2D1AO60880 128 aa14.29□□□□□ -0.12
SCAMP3-209ENST00000497470 RRN3P1Q2M238 152 aa14.29□□□□□ -0.12
SCAMP3-209ENST00000497470 DAZAP1Q96EP5 407 aaKnown RBP14.29□□□□□ -0.12
SCAMP3-209ENST00000497470 X6R8D5 127 aa14.29□□□□□ -0.12
SCAMP3-209ENST00000497470 TRGV11A0A075B6L2 103 aa14.28□□□□□ -0.12
SCAMP3-209ENST00000497470 OR11H2Q8NH07 326 aa14.28□□□□□ -0.12
SCAMP3-209ENST00000497470 TMEM263Q8WUH6 116 aaKnown RBP14.28□□□□□ -0.12
SCAMP3-209ENST00000497470 OSTCQ9NRP0 149 aa14.28□□□□□ -0.12
SCAMP3-209ENST00000497470 CARHSP1Q9Y2V2 147 aaKnown RBP14.28□□□□□ -0.12
SCAMP3-209ENST00000497470 J3KRW8 73 aa14.27□□□□□ -0.13
SCAMP3-209ENST00000497470 K7EN84 100 aa14.27□□□□□ -0.13
SCAMP3-209ENST00000497470 MGST1P10620 155 aaKnown RBP14.27□□□□□ -0.13
SCAMP3-209ENST00000497470 RPS20P60866 119 aaKnown RBP14.27□□□□□ -0.13
SCAMP3-209ENST00000497470 RPL23P62829 140 aaKnown RBP14.27□□□□□ -0.13
SCAMP3-209ENST00000497470 CT83Q5H943 113 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms