RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 KIR2DL5BA0A0G2JN68 375 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 KIR2DL5BA0A0G2JPC4 375 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 CRXO43186 299 aaPredicted RBP13.37□□□□□ -0.27
RGP1-202ENST00000496906 KIR2DL5AQ8N109 375 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 KIR2DL5BQ8NHK3 375 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 ZC2HC1AQ96GY0 325 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 CSTL1Q9H114 145 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 AMBPP02760 352 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 GPX1P07203 203 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 SMUG1Q53HV7 270 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 GFI1BQ5VTD9 330 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 XCL2Q9UBD3 114 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 LY96Q9Y6Y9 160 aa13.37□□□□□ -0.27
RGP1-202ENST00000496906 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
RGP1-202ENST00000496906 FRMD6-AS1P0C7T7 363 aa13.36□□□□□ -0.27
RGP1-202ENST00000496906 APOC4P55056 127 aa13.36□□□□□ -0.27
RGP1-202ENST00000496906 BTN1A1Q13410 526 aa13.36□□□□□ -0.27
RGP1-202ENST00000496906 OCC1Q8TAD7 63 aa13.36□□□□□ -0.27
RGP1-202ENST00000496906 NAT8Q9UHE5 227 aa13.36□□□□□ -0.27
RGP1-202ENST00000496906 F8W036 122 aa13.35□□□□□ -0.27
RGP1-202ENST00000496906 GCGP01275 180 aa13.35□□□□□ -0.27
RGP1-202ENST00000496906 RNASE4P34096 147 aaKnown RBP13.35□□□□□ -0.27
RGP1-202ENST00000496906 ZNF80P51504 273 aaPredicted RBP13.35□□□□□ -0.27
RGP1-202ENST00000496906 TMEM241Q24JQ0 296 aa13.35□□□□□ -0.27
RGP1-202ENST00000496906 NIPSNAP3BQ9BS92 247 aa13.35□□□□□ -0.27
RGP1-202ENST00000496906 C1QTNF4Q9BXJ3 329 aa13.35□□□□□ -0.27
RGP1-202ENST00000496906 SEC11CQ9BY50 192 aa13.35□□□□□ -0.27
RGP1-202ENST00000496906 C7orf71A4D174 169 aa13.34□□□□□ -0.27
RGP1-202ENST00000496906 K7EN84 100 aa13.34□□□□□ -0.27
RGP1-202ENST00000496906 MGST1P10620 155 aaKnown RBP13.34□□□□□ -0.27
RGP1-202ENST00000496906 Q6AWC8 147 aa13.34□□□□□ -0.27
RGP1-202ENST00000496906 LINC01551Q86U37 167 aa13.34□□□□□ -0.27
RGP1-202ENST00000496906 INSP01308 110 aa13.33□□□□□ -0.28
RGP1-202ENST00000496906 CRIP1P50238 77 aa13.33□□□□□ -0.28
RGP1-202ENST00000496906 C10orf91Q5T1B1 145 aa13.33□□□□□ -0.28
RGP1-202ENST00000496906 SDF2L1Q9HCN8 221 aa13.33□□□□□ -0.28
RGP1-202ENST00000496906 TRAV12-3A0A0B4J271 114 aa13.32□□□□□ -0.28
RGP1-202ENST00000496906 PFN1P07737 140 aaKnown RBP13.32□□□□□ -0.28
RGP1-202ENST00000496906 RBMY1A1P0DJD3 496 aaKnown RBP13.32□□□□□ -0.28
RGP1-202ENST00000496906 RBMY1CP0DJD4 496 aa13.32□□□□□ -0.28
RGP1-202ENST00000496906 RPL23P62829 140 aaKnown RBP13.32□□□□□ -0.28
RGP1-202ENST00000496906 RBMY1FQ15415 496 aaKnown RBP13.32□□□□□ -0.28
RGP1-202ENST00000496906 Q6ZQT7 251 aa13.32□□□□□ -0.28
RGP1-202ENST00000496906 CSNK1G2-AS1Q8NCQ2 148 aa13.32□□□□□ -0.28
RGP1-202ENST00000496906 ZNF324O75467 553 aaPredicted RBP13.32□□□□□ -0.28
RGP1-202ENST00000496906 OR5I1Q13606 314 aa13.32□□□□□ -0.28
RGP1-202ENST00000496906 DEFB121Q5J5C9 76 aa13.32□□□□□ -0.28
RGP1-202ENST00000496906 PRR27Q6MZM9 219 aa13.32□□□□□ -0.28
RGP1-202ENST00000496906 TRAV21A0A0B4J279 112 aa13.31□□□□□ -0.28
RGP1-202ENST00000496906 UBE2CO00762 179 aa13.31□□□□□ -0.28
RGP1-202ENST00000496906 FAM162BQ5T6X4 162 aa13.31□□□□□ -0.28
RGP1-202ENST00000496906 C20orf144Q9BQM9 153 aa13.31□□□□□ -0.28
RGP1-202ENST00000496906 BIN3Q9NQY0 253 aa13.31□□□□□ -0.28
RGP1-202ENST00000496906 CARHSP1Q9Y2V2 147 aaKnown RBP13.31□□□□□ -0.28
RGP1-202ENST00000496906 FABP5P3A8MUU1 101 aa13.3□□□□□ -0.28
RGP1-202ENST00000496906 KRBOX1C9JBD0 128 aa13.3□□□□□ -0.28
RGP1-202ENST00000496906 SH2D1AO60880 128 aa13.3□□□□□ -0.28
RGP1-202ENST00000496906 ADIRFQ15847 76 aa13.3□□□□□ -0.28
RGP1-202ENST00000496906 C1orf158Q8N1D5 194 aa13.3□□□□□ -0.28
RGP1-202ENST00000496906 MRAPQ8TCY5 172 aa13.3□□□□□ -0.28
RGP1-202ENST00000496906 PNRC1Q12796 327 aaPredicted RBP13.29□□□□□ -0.28
RGP1-202ENST00000496906 C19orf71A6NCJ1 209 aa13.28□□□□□ -0.28
RGP1-202ENST00000496906 ISOC2Q96AB3 205 aa13.28□□□□□ -0.28
RGP1-202ENST00000496906 C11orf21Q9P2W6 132 aa13.28□□□□□ -0.28
RGP1-202ENST00000496906 DEFA6Q01524 100 aa13.28□□□□□ -0.28
RGP1-202ENST00000496906 DEFB135Q30KP9 77 aa13.28□□□□□ -0.28
RGP1-202ENST00000496906 ZNF705AQ6ZN79 300 aaPredicted RBP13.28□□□□□ -0.28
RGP1-202ENST00000496906 Q6ZWC4 215 aa13.28□□□□□ -0.28
RGP1-202ENST00000496906 FBN3Q75N90 2809 aa13.27□□□□□ -0.28
RGP1-202ENST00000496906 H7BYZ3 331 aa13.27□□□□□ -0.29
RGP1-202ENST00000496906 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.29
RGP1-202ENST00000496906 RNASE7Q9H1E1 156 aaKnown RBP13.27□□□□□ -0.29
RGP1-202ENST00000496906 GOLT1BQ9Y3E0 138 aa13.27□□□□□ -0.29
RGP1-202ENST00000496906 MUC21Q5SSG8 566 aa13.26□□□□□ -0.29
RGP1-202ENST00000496906 FAM231DQ6ZW35 169 aa13.26□□□□□ -0.29
RGP1-202ENST00000496906 SBSPONQ8IVN8 264 aa13.26□□□□□ -0.29
RGP1-202ENST00000496906 NUDT10Q8NFP7 164 aa13.26□□□□□ -0.29
RGP1-202ENST00000496906 DAZAP1Q96EP5 407 aaKnown RBP13.26□□□□□ -0.29
RGP1-202ENST00000496906 NUDT11Q96G61 164 aa13.26□□□□□ -0.29
RGP1-202ENST00000496906 LINC01587Q99440 93 aa13.26□□□□□ -0.29
RGP1-202ENST00000496906 TMEM208Q9BTX3 173 aa13.26□□□□□ -0.29
RGP1-202ENST00000496906 IGHV3OR16-12A0A075B7B8 117 aa13.25□□□□□ -0.29
RGP1-202ENST00000496906 LINC01559Q495D7 138 aa13.25□□□□□ -0.29
RGP1-202ENST00000496906 IBA57Q5T440 356 aaKnown RBP13.25□□□□□ -0.29
RGP1-202ENST00000496906 RNF183Q96D59 192 aa13.25□□□□□ -0.29
RGP1-202ENST00000496906 RCHY1Q96PM5 261 aa13.25□□□□□ -0.29
RGP1-202ENST00000496906 PYGO2Q9BRQ0 406 aa13.25□□□□□ -0.29
RGP1-202ENST00000496906 NAGKQ9UJ70 344 aa13.25□□□□□ -0.29
RGP1-202ENST00000496906 IGHV1OR15-1A0A075B7D0 117 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 P01737 135 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 APOC3P02656 99 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 ERVFC1-1P60608 527 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 TDRG1Q3Y452 100 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 ANXA2RQ3ZCQ2 193 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 FAM159AQ6UWV7 190 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 SFRP2Q96HF1 295 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 LINC00467Q9BRT7 94 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 M0R036 132 aa13.24□□□□□ -0.29
RGP1-202ENST00000496906 ORM1P02763 201 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms