RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 SLIT2O94813 1529 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 ZMYM4Q5VZL5 1548 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 KDM5DQ9BY66 1539 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 CNTLNQ9NXG0 1405 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 KIAA1107Q9UPP5 1409 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.41□□□□□ -2.02
SNX13-211ENST00000496855 HMSDA8MTL9 139 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 CTSGP08311 255 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 ASAH2BP0C7U1 165 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 METTL15P1P0C7V9 234 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 RBP2P50120 134 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 MRPS36P82909 103 aaKnown RBP2.41□□□□□ -2.02
SNX13-211ENST00000496855 TPRXLQ17RH7 258 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 CLLU1Q5K131 121 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 IZUMO2Q6UXV1 221 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 OR8B3Q8NGG8 313 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 CHD6Q8TD26 2715 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 CFAP47Q6ZTR5 3102 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 KIF14Q15058 1648 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 MYOM3Q5VTT5 1437 aa2.41□□□□□ -2.02
SNX13-211ENST00000496855 ZNF705FA8MVS1 300 aaPredicted RBP2.4□□□□□ -2.02
SNX13-211ENST00000496855 TPT1P13693 172 aaKnown RBP2.4□□□□□ -2.02
SNX13-211ENST00000496855 ZNF846Q147U1 533 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 IGFBP7Q16270 282 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 MEIG1Q5JSS6 88 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 FAM19A2Q8N3H0 131 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 TCTEX1D1Q8N7M0 179 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 HYLS1Q96M11 299 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 LINC00467Q9BRT7 94 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 SLC50A1Q9BRV3 221 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 TMEM191AQ9H0A3 160 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 SLC35B3Q9H1N7 401 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 CST9LQ9H4G1 147 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 BDP1A6H8Y1 2624 aa2.4□□□□□ -2.02
SNX13-211ENST00000496855 MAP3K1Q13233 1512 aa2.4□□□□□ -2.03
SNX13-211ENST00000496855 FAM135AQ9P2D6 1515 aa2.4□□□□□ -2.03
SNX13-211ENST00000496855 MYH7P12883 1935 aa2.4□□□□□ -2.03
SNX13-211ENST00000496855 UACAQ9BZF9 1416 aa2.4□□□□□ -2.03
SNX13-211ENST00000496855 NUMA1Q14980 2115 aa2.4□□□□□ -2.03
SNX13-211ENST00000496855 TET3O43151 1660 aa2.4□□□□□ -2.03
SNX13-211ENST00000496855 ITSN2Q9NZM3 1697 aa2.4□□□□□ -2.03
SNX13-211ENST00000496855 TRIOBPQ9H2D6 2365 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 A0A0G2JMM0 328 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 A0A0G2JQZ4 141 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 A0A1W2PPB8 328 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 KIR3DP1A8MWS1 328 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 CRPP02741 224 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 APODP05090 189 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 RNASE2P10153 161 aaKnown RBP2.39□□□□□ -2.03
SNX13-211ENST00000496855 SSR2P43308 183 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 SNX29P2Q8IUI4 249 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 OR4X2Q8NGF9 303 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 SOX21Q9Y651 276 aaPredicted RBP2.39□□□□□ -2.03
SNX13-211ENST00000496855 EHBP1L1Q8N3D4 1523 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 MYH6P13533 1939 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 PLXNA3P51805 1871 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 MIFP14174 115 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 HINT1P49773 126 aaPredicted RBP2.39□□□□□ -2.03
SNX13-211ENST00000496855 TMEM258P61165 79 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 LINC00301Q8NCQ3 95 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 PP6455Q8WZ26 134 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 METTL1Q9UBP6 276 aaKnown RBP2.39□□□□□ -2.03
SNX13-211ENST00000496855 BOKQ9UMX3 212 aaPredicted RBP2.39□□□□□ -2.03
SNX13-211ENST00000496855 RPL26L1Q9UNX3 145 aaKnown RBP2.39□□□□□ -2.03
SNX13-211ENST00000496855 TPRKBQ9Y3C4 175 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 LY96Q9Y6Y9 160 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 CENPFP49454 3210 aa2.39□□□□□ -2.03
SNX13-211ENST00000496855 ATP10BO94823 1461 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 ZNF462Q96JM2 2506 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 SDK2Q58EX2 2172 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 ADGRB2O60241 1585 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 GLI3P10071 1580 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 TRBV20-1A0A075B6N2 111 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 hDV103S1A0JD37 113 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 C5orf67F2Z3F1 127 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 M0R233 179 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 HIST1H1BP16401 226 aaKnown RBP2.38□□□□□ -2.03
SNX13-211ENST00000496855 FGF7P21781 194 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 ERHP84090 104 aaKnown RBP2.38□□□□□ -2.03
SNX13-211ENST00000496855 LINC00269Q8N2A0 174 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 OR2T35Q8NGX2 323 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 OTOSQ8NHW6 89 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 SPACA4Q8TDM5 124 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 CIB3Q96Q77 187 aaPredicted RBP2.38□□□□□ -2.03
SNX13-211ENST00000496855 MROH2AA6NES4 1674 aa2.38□□□□□ -2.03
SNX13-211ENST00000496855 DEPDC5O75140 1603 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 NAV2Q8IVL1 2488 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 ZFHX2Q9C0A1 2572 aaPredicted RBP2.37□□□□□ -2.03
SNX13-211ENST00000496855 ADGRB3O60242 1522 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 ATG2AQ2TAZ0 1938 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 MAGI2Q86UL8 1455 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 C20orf202A1L168 122 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 CDC42EP2O14613 210 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 SAA1P0DJI8 122 aaPredicted RBP2.37□□□□□ -2.03
SNX13-211ENST00000496855 PCBD1P61457 104 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 OR5AS1Q8N127 324 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 C10orf111Q8N326 155 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 RAB37Q96AX2 223 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 PSMG3Q9BT73 122 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms