RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TP53TG1Q9Y2A0 90 aa15.87■□□□□ 0.13
C9orf3-222ENST00000496567 LTAP01374 205 aa15.86■□□□□ 0.13
C9orf3-222ENST00000496567 SRP19P09132 144 aaKnown RBP15.86■□□□□ 0.13
C9orf3-222ENST00000496567 GFI1BQ5VTD9 330 aa15.86■□□□□ 0.13
C9orf3-222ENST00000496567 RNF183Q96D59 192 aa15.86■□□□□ 0.13
C9orf3-222ENST00000496567 SPATA25Q9BR10 227 aa15.86■□□□□ 0.13
C9orf3-222ENST00000496567 TM2D3Q9BRN9 247 aa15.86■□□□□ 0.13
C9orf3-222ENST00000496567 DERL1Q9BUN8 251 aa15.86■□□□□ 0.13
C9orf3-222ENST00000496567 TMEM218A2RU14 115 aa15.85■□□□□ 0.13
C9orf3-222ENST00000496567 C7orf71A4D174 169 aa15.85■□□□□ 0.13
C9orf3-222ENST00000496567 RNASE4P34096 147 aaKnown RBP15.85■□□□□ 0.13
C9orf3-222ENST00000496567 KIR3DS1Q14943 382 aa15.85■□□□□ 0.13
C9orf3-222ENST00000496567 ZMAT4Q9H898 229 aa15.85■□□□□ 0.13
C9orf3-222ENST00000496567 GOLT1BQ9Y3E0 138 aa15.85■□□□□ 0.13
C9orf3-222ENST00000496567 SPRY2O43597 315 aa15.84■□□□□ 0.13
C9orf3-222ENST00000496567 SFTA3P0C7M3 94 aa15.84■□□□□ 0.13
C9orf3-222ENST00000496567 SMUG1Q53HV7 270 aa15.84■□□□□ 0.13
C9orf3-222ENST00000496567 NHLRC4P0CG21 123 aaPredicted RBP15.83■□□□□ 0.13
C9orf3-222ENST00000496567 CEBPGP53567 150 aa15.83■□□□□ 0.13
C9orf3-222ENST00000496567 BAGE2Q86Y30 109 aa15.83■□□□□ 0.13
C9orf3-222ENST00000496567 TMEM256Q8N2U0 113 aa15.83■□□□□ 0.13
C9orf3-222ENST00000496567 C8orf49Q96NF6 230 aa15.83■□□□□ 0.13
C9orf3-222ENST00000496567 NIPSNAP3BQ9BS92 247 aa15.83■□□□□ 0.13
C9orf3-222ENST00000496567 TMEM208Q9BTX3 173 aa15.83■□□□□ 0.13
C9orf3-222ENST00000496567 TRAV12-3A0A0B4J271 114 aa15.83■□□□□ 0.12
C9orf3-222ENST00000496567 BTN1A1Q13410 526 aa15.83■□□□□ 0.12
C9orf3-222ENST00000496567 PRR9Q5T870 116 aa15.83■□□□□ 0.12
C9orf3-222ENST00000496567 TMEM183AQ8IXX5 376 aa15.83■□□□□ 0.12
C9orf3-222ENST00000496567 PARLQ9H300 379 aa15.83■□□□□ 0.12
C9orf3-222ENST00000496567 ADCYAP1P18509 176 aa15.82■□□□□ 0.12
C9orf3-222ENST00000496567 GNG4P50150 75 aa15.82■□□□□ 0.12
C9orf3-222ENST00000496567 C1orf158Q8N1D5 194 aa15.82■□□□□ 0.12
C9orf3-222ENST00000496567 OVOL2Q9BRP0 275 aa15.82■□□□□ 0.12
C9orf3-222ENST00000496567 S100A1P23297 94 aa15.81■□□□□ 0.12
C9orf3-222ENST00000496567 ZNF674Q2M3X9 581 aa15.81■□□□□ 0.12
C9orf3-222ENST00000496567 CENPWQ5EE01 88 aa15.81■□□□□ 0.12
C9orf3-222ENST00000496567 Q6AWC8 147 aa15.81■□□□□ 0.12
C9orf3-222ENST00000496567 ZNF705AQ6ZN79 300 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-222ENST00000496567 COX8CQ7Z4L0 72 aa15.81■□□□□ 0.12
C9orf3-222ENST00000496567 IGHV3OR16-12A0A075B7B8 117 aa15.8■□□□□ 0.12
C9orf3-222ENST00000496567 KRBOX1C9JBD0 128 aa15.8■□□□□ 0.12
C9orf3-222ENST00000496567 H7BYZ3 331 aa15.8■□□□□ 0.12
C9orf3-222ENST00000496567 ZNF324O75467 553 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-222ENST00000496567 GCGP01275 180 aa15.8■□□□□ 0.12
C9orf3-222ENST00000496567 OR11H2Q8NH07 326 aa15.8■□□□□ 0.12
C9orf3-222ENST00000496567 SMIM12Q96EX1 92 aa15.8■□□□□ 0.12
C9orf3-222ENST00000496567 LINC01587Q99440 93 aa15.8■□□□□ 0.12
C9orf3-222ENST00000496567 RETNQ9HD89 108 aa15.8■□□□□ 0.12
C9orf3-222ENST00000496567 TRAV21A0A0B4J279 112 aa15.79■□□□□ 0.12
C9orf3-222ENST00000496567 F8W036 122 aa15.79■□□□□ 0.12
C9orf3-222ENST00000496567 RBMY1A1P0DJD3 496 aaKnown RBP15.79■□□□□ 0.12
C9orf3-222ENST00000496567 RBMY1CP0DJD4 496 aa15.79■□□□□ 0.12
C9orf3-222ENST00000496567 RBMY1FQ15415 496 aaKnown RBP15.79■□□□□ 0.12
C9orf3-222ENST00000496567 MLST8Q9BVC4 326 aa15.79■□□□□ 0.12
C9orf3-222ENST00000496567 C9JCJ5 164 aa15.79■□□□□ 0.12
C9orf3-222ENST00000496567 NHLRC2Q8NBF2 726 aa15.79■□□□□ 0.12
C9orf3-222ENST00000496567 PFN1P07737 140 aaKnown RBP15.78■□□□□ 0.12
C9orf3-222ENST00000496567 ZC2HC1AQ96GY0 325 aa15.78■□□□□ 0.12
C9orf3-222ENST00000496567 NEU1Q99519 415 aa15.78■□□□□ 0.12
C9orf3-222ENST00000496567 SMIM7Q9BQ49 75 aa15.78■□□□□ 0.12
C9orf3-222ENST00000496567 PYGO2Q9BRQ0 406 aa15.78■□□□□ 0.12
C9orf3-222ENST00000496567 NBEAL2Q6ZNJ1 2754 aa15.77■□□□□ 0.12
C9orf3-222ENST00000496567 TRBV20OR9-2A0A075B6H5 130 aa15.77■□□□□ 0.11
C9orf3-222ENST00000496567 SMIM9A6NGZ8 99 aa15.77■□□□□ 0.11
C9orf3-222ENST00000496567 ZNF80P51504 273 aaPredicted RBP15.77■□□□□ 0.11
C9orf3-222ENST00000496567 FAM74A3Q4VXF1 159 aa15.77■□□□□ 0.11
C9orf3-222ENST00000496567 SOHLH1Q5JUK2 328 aa15.77■□□□□ 0.11
C9orf3-222ENST00000496567 SEC11CQ9BY50 192 aa15.77■□□□□ 0.11
C9orf3-222ENST00000496567 PRKDCP78527 4128 aaKnown RBP15.76■□□□□ 0.11
C9orf3-222ENST00000496567 FABP5P3A8MUU1 101 aa15.76■□□□□ 0.11
C9orf3-222ENST00000496567 ZNF727A8MUV8 499 aa15.76■□□□□ 0.11
C9orf3-222ENST00000496567 C10orf91Q5T1B1 145 aa15.76■□□□□ 0.11
C9orf3-222ENST00000496567 X6R8D5 127 aa15.76■□□□□ 0.11
C9orf3-222ENST00000496567 MIFP14174 115 aa15.75■□□□□ 0.11
C9orf3-222ENST00000496567 FAM162BQ5T6X4 162 aa15.75■□□□□ 0.11
C9orf3-222ENST00000496567 BIN3Q9NQY0 253 aa15.75■□□□□ 0.11
C9orf3-222ENST00000496567 IGLV2-8P01709 118 aa15.75■□□□□ 0.11
C9orf3-222ENST00000496567 MGST1P10620 155 aaKnown RBP15.75■□□□□ 0.11
C9orf3-222ENST00000496567 RRN3P1Q2M238 152 aa15.75■□□□□ 0.11
C9orf3-222ENST00000496567 Q6ZQT7 251 aa15.75■□□□□ 0.11
C9orf3-222ENST00000496567 LINC00467Q9BRT7 94 aa15.75■□□□□ 0.11
C9orf3-222ENST00000496567 CARHSP1Q9Y2V2 147 aaKnown RBP15.75■□□□□ 0.11
C9orf3-222ENST00000496567 LY96Q9Y6Y9 160 aa15.75■□□□□ 0.11
C9orf3-222ENST00000496567 IGHV1OR15-1A0A075B7D0 117 aa15.74■□□□□ 0.11
C9orf3-222ENST00000496567 HTN1P15515 57 aa15.74■□□□□ 0.11
C9orf3-222ENST00000496567 FAM159AQ6UWV7 190 aa15.74■□□□□ 0.11
C9orf3-222ENST00000496567 PGPEP1LA6NFU8 196 aa15.73■□□□□ 0.11
C9orf3-222ENST00000496567 APOC3P02656 99 aa15.73■□□□□ 0.11
C9orf3-222ENST00000496567 CRIP1P50238 77 aa15.73■□□□□ 0.11
C9orf3-222ENST00000496567 ZNF705GA8MUZ8 300 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-222ENST00000496567 PRR27Q6MZM9 219 aa15.72■□□□□ 0.11
C9orf3-222ENST00000496567 OCC1Q8TAD7 63 aa15.72■□□□□ 0.11
C9orf3-222ENST00000496567 NAGKQ9UJ70 344 aa15.72■□□□□ 0.11
C9orf3-222ENST00000496567 SH2D1AO60880 128 aa15.71■□□□□ 0.11
C9orf3-222ENST00000496567 MUC21Q5SSG8 566 aa15.71■□□□□ 0.11
C9orf3-222ENST00000496567 KCNS1Q96KK3 526 aa15.71■□□□□ 0.11
C9orf3-222ENST00000496567 DNAH9Q9NYC9 4486 aa15.71■□□□□ 0.1
C9orf3-222ENST00000496567 CBY3A6NI87 242 aa15.7■□□□□ 0.1
C9orf3-222ENST00000496567 TMEM241Q24JQ0 296 aa15.7■□□□□ 0.1
C9orf3-222ENST00000496567 TDRG1Q3Y452 100 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms