RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 C18orf15Q96N68 181 aa8.94□□□□□ -0.98
FN1-226ENST00000496542 ATP5SQ99766 215 aa8.94□□□□□ -0.98
FN1-226ENST00000496542 PAX4O43316 350 aa8.93□□□□□ -0.98
FN1-226ENST00000496542 SSNA1O43805 119 aa8.93□□□□□ -0.98
FN1-226ENST00000496542 CSN1S1P47710 185 aa8.93□□□□□ -0.98
FN1-226ENST00000496542 RANP62826 216 aaKnown RBP8.93□□□□□ -0.98
FN1-226ENST00000496542 SPATA12Q7Z6I5 190 aa8.93□□□□□ -0.98
FN1-226ENST00000496542 ST6GAL2Q96JF0 529 aa8.93□□□□□ -0.98
FN1-226ENST00000496542 SMIM3Q9BZL3 60 aa8.93□□□□□ -0.98
FN1-226ENST00000496542 HSPB11Q9Y547 144 aa8.93□□□□□ -0.98
FN1-226ENST00000496542 A0A1W2PPQ1 181 aa8.92□□□□□ -0.98
FN1-226ENST00000496542 ZNF415Q09FC8 603 aa8.92□□□□□ -0.98
FN1-226ENST00000496542 MUC21Q5SSG8 566 aa8.92□□□□□ -0.98
FN1-226ENST00000496542 ICOSQ9Y6W8 199 aa8.92□□□□□ -0.98
FN1-226ENST00000496542 TRBV7-9A0A0J9YWB2 115 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 EIF3GO75821 320 aaKnown RBP eCLIP8.91□□□□□ -0.98
FN1-226ENST00000496542 MPC2O95563 127 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 IFNA5P01569 189 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 PET100P0DJ07 73 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 KHDC3LQ587J8 217 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 SCGB1C1Q8TD33 95 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 C8orf49Q96NF6 230 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 MARVELD1Q9BSK0 173 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 KRTAP4-5Q9BYR2 181 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 PTTG2Q9NZH5 202 aa8.91□□□□□ -0.98
FN1-226ENST00000496542 RBAKDNA6NC62 111 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 CDK2AP2O75956 126 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 NXPH4O95158 308 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 RPL12P30050 165 aaKnown RBP8.9□□□□□ -0.98
FN1-226ENST00000496542 LINC00315P59091 139 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 TAS2R45P59539 299 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 ZNF266Q14584 549 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 LYPD1Q8N2G4 141 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 HYLS1Q96M11 299 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 MBD2Q9UBB5 411 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 RPH3ALQ9UNE2 315 aa8.9□□□□□ -0.98
FN1-226ENST00000496542 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
FN1-226ENST00000496542 DIRC3C9JPN6 131 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 SIVA1O15304 175 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 DEFA1P59665 94 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 DEFA3P59666 94 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 TMEM183BQ1AE95 376 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 TMEM183AQ8IXX5 376 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 MDFICQ9P1T7 246 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 PRO0255Q9UI72 69 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 NAGKQ9UJ70 344 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 DNAH5Q8TE73 4624 aa8.89□□□□□ -0.99
FN1-226ENST00000496542 TRGV4A0A0C4DH28 118 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 A6NHS1 94 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 CRYBA4P53673 196 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 KRTAP10-2P60368 255 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 SLAQ13239 276 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 FHL2Q14192 279 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 MAPKAPK5-AS1Q8N8E1 139 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 CMTM2Q8TAZ6 248 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 OTORQ9NRC9 128 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 HHLA3Q9XRX5 114 aa8.88□□□□□ -0.99
FN1-226ENST00000496542 TRGV11A0A075B6L2 103 aa8.87□□□□□ -0.99
FN1-226ENST00000496542 SFTA3P0C7M3 94 aa8.87□□□□□ -0.99
FN1-226ENST00000496542 BTF3P20290 206 aaKnown RBP8.87□□□□□ -0.99
FN1-226ENST00000496542 Q6AWC8 147 aa8.87□□□□□ -0.99
FN1-226ENST00000496542 FAM159AQ6UWV7 190 aa8.87□□□□□ -0.99
FN1-226ENST00000496542 WFDC1Q9HC57 220 aa8.87□□□□□ -0.99
FN1-226ENST00000496542 LENEPQ9Y5L5 61 aa8.87□□□□□ -0.99
FN1-226ENST00000496542 PGPA6NDG6 321 aa8.86□□□□□ -0.99
FN1-226ENST00000496542 RAB2AP61019 212 aa8.86□□□□□ -0.99
FN1-226ENST00000496542 MRPL23Q16540 153 aaKnown RBP8.86□□□□□ -0.99
FN1-226ENST00000496542 ACOT6Q3I5F7 207 aaPredicted RBP8.86□□□□□ -0.99
FN1-226ENST00000496542 FAM74A1Q5RGS3 127 aa8.86□□□□□ -0.99
FN1-226ENST00000496542 GOLT1AQ6ZVE7 132 aa8.86□□□□□ -0.99
FN1-226ENST00000496542 PCNPQ8WW12 178 aaKnown RBP8.86□□□□□ -0.99
FN1-226ENST00000496542 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
FN1-226ENST00000496542 A0A1W2PPV4 95 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 F6UZH7 168 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 HMGB3O15347 200 aaKnown RBP8.85□□□□□ -0.99
FN1-226ENST00000496542 SRIP30626 198 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 PQLC2Q6ZP29 291 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
FN1-226ENST00000496542 NEGR1Q7Z3B1 354 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 OR10G4Q8NGN3 311 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 TMED6Q8WW62 240 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 SPXQ9BT56 116 aa8.85□□□□□ -0.99
FN1-226ENST00000496542 TRAV8-1A0A0A6YYK1 113 aa8.84□□□□□ -0.99
FN1-226ENST00000496542 K7EQD1 137 aa8.84□□□□□ -0.99
FN1-226ENST00000496542 GYPEP15421 78 aa8.84□□□□□ -0.99
FN1-226ENST00000496542 GNG5P63218 68 aa8.84□□□□□ -0.99
FN1-226ENST00000496542 RASL10AQ92737 203 aa8.84□□□□□ -0.99
FN1-226ENST00000496542 TNFRSF18Q9Y5U5 241 aa8.84□□□□□ -0.99
FN1-226ENST00000496542 GNRH2O43555 120 aa8.83□□□□□ -1
FN1-226ENST00000496542 TDRG1Q3Y452 100 aa8.83□□□□□ -1
FN1-226ENST00000496542 OR10G9Q8NGN4 311 aa8.83□□□□□ -1
FN1-226ENST00000496542 OR10G7Q8NGN6 311 aa8.83□□□□□ -1
FN1-226ENST00000496542 TREM1Q9NP99 234 aa8.83□□□□□ -1
FN1-226ENST00000496542 ALG5Q9Y673 324 aa8.83□□□□□ -1
FN1-226ENST00000496542 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
FN1-226ENST00000496542 TRAV21A0A0B4J279 112 aa8.82□□□□□ -1
FN1-226ENST00000496542 IGHV3-16A0A0C4DH30 117 aa8.82□□□□□ -1
FN1-226ENST00000496542 M0R2P5 195 aa8.82□□□□□ -1
FN1-226ENST00000496542 EREGO14944 169 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms