RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 RRN3P1Q2M238 152 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 DPPA3Q6W0C5 159 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 RXFP4Q8TDU9 374 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 LINC00477Q96M19 166 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 C20orf144Q9BQM9 153 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 PPP1R14DQ9NXH3 145 aa10.21□□□□□ -0.77
CXCL12-208ENST00000496375 YTHDF2Q9Y5A9 579 aaKnown RBP10.21□□□□□ -0.77
CXCL12-208ENST00000496375 PRSS29PA6NIE9 313 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 RTL8CO15255 209 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 INSP01308 110 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 CT45A10P0DMU9 189 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 CRISP2P16562 243 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 TSPOP30536 169 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 LGALS9BQ3B8N2 356 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 TMEM208Q9BTX3 173 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 AGPAT4-IT1Q9H0P7 198 aa10.2□□□□□ -0.78
CXCL12-208ENST00000496375 IGLV2-18A0A075B6J9 118 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 A0A1W2PRE2 83 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 TMEM218A2RU14 115 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 DIRC3C9JPN6 131 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 CSN1S1P47710 185 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 TMEM256Q8N2U0 113 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 LYPD6BQ8NI32 183 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 MBD3L1Q8WWY6 194 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 ABCA13Q86UQ4 5058 aa10.19□□□□□ -0.78
CXCL12-208ENST00000496375 IGKV2-40A0A087WW87 121 aaPredicted RBP10.18□□□□□ -0.78
CXCL12-208ENST00000496375 MAP1LC3B2A6NCE7 125 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 PGPA6NDG6 321 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 KLLNB2CW77 178 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 IGKV2D-40P01614 121 aaPredicted RBP10.18□□□□□ -0.78
CXCL12-208ENST00000496375 PRB4P10163 310 aaPredicted RBP10.18□□□□□ -0.78
CXCL12-208ENST00000496375 LEPP41159 167 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 DAD1P61803 113 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 C5orf17Q8NAS9 161 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 MAP1LC3BQ9GZQ8 125 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 ZNF492Q9P255 531 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 ARL2-SNX15V9GYD0 113 aa10.18□□□□□ -0.78
CXCL12-208ENST00000496375 SERTM2A0A1B0GWG4 89 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 GGTLC3B5MD39 225 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 APOC3P02656 99 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 FHITP49789 147 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 ERCC8Q13216 396 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 C10orf91Q5T1B1 145 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 TMEM78Q5T7P6 136 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 GFI1BQ5VTD9 330 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 TMEM88Q6PEY1 159 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 VGLL1Q99990 258 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 TREM1Q9NP99 234 aa10.17□□□□□ -0.78
CXCL12-208ENST00000496375 TRAV12-2A0A075B6T6 113 aa10.16□□□□□ -0.78
CXCL12-208ENST00000496375 ZNF705GA8MUZ8 300 aaPredicted RBP10.16□□□□□ -0.78
CXCL12-208ENST00000496375 PRM2P04554 102 aa10.16□□□□□ -0.78
CXCL12-208ENST00000496375 ZNF138P52744 262 aa10.16□□□□□ -0.78
CXCL12-208ENST00000496375 RNF212Q495C1 297 aa10.16□□□□□ -0.78
CXCL12-208ENST00000496375 ZFAND2AQ8N6M9 145 aa10.16□□□□□ -0.78
CXCL12-208ENST00000496375 CMTM2Q8TAZ6 248 aa10.16□□□□□ -0.78
CXCL12-208ENST00000496375 SEC11CQ9BY50 192 aa10.16□□□□□ -0.78
CXCL12-208ENST00000496375 NKX6-2Q9C056 277 aaPredicted RBP10.16□□□□□ -0.78
CXCL12-208ENST00000496375 NACAE9PAV3 2078 aa10.16□□□□□ -0.78
CXCL12-208ENST00000496375 TRAV1-1A0A0B4J248 108 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 H7BYZ3 331 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 FGF8P55075 233 aaPredicted RBP10.15□□□□□ -0.78
CXCL12-208ENST00000496375 KIR3DS1Q14943 382 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 PEA15Q15121 130 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 Q6ZR54 194 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 SVBPQ8N300 66 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 FAM213BQ8TBF2 198 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 LINC00467Q9BRT7 94 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 TMPRSS5Q9H3S3 457 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 SMDT1Q9H4I9 107 aa10.15□□□□□ -0.78
CXCL12-208ENST00000496375 CARHSP1Q9Y2V2 147 aaKnown RBP10.15□□□□□ -0.78
CXCL12-208ENST00000496375 FAM74A7A6NL05 159 aa10.14□□□□□ -0.79
CXCL12-208ENST00000496375 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
CXCL12-208ENST00000496375 F8W036 122 aa10.14□□□□□ -0.79
CXCL12-208ENST00000496375 TCRAP04437 139 aa10.14□□□□□ -0.79
CXCL12-208ENST00000496375 MED14OSP0DP75 135 aa10.14□□□□□ -0.79
CXCL12-208ENST00000496375 TAS2R60P59551 318 aa10.14□□□□□ -0.79
CXCL12-208ENST00000496375 TCEAL7Q9BRU2 100 aa10.14□□□□□ -0.79
CXCL12-208ENST00000496375 C7orf71A4D174 169 aa10.13□□□□□ -0.79
CXCL12-208ENST00000496375 FBLL1A6NHQ2 334 aaKnown RBP10.13□□□□□ -0.79
CXCL12-208ENST00000496375 ZNF324O75467 553 aaPredicted RBP10.13□□□□□ -0.79
CXCL12-208ENST00000496375 SCO1O75880 301 aa10.13□□□□□ -0.79
CXCL12-208ENST00000496375 H2AFB1P0C5Y9 115 aa10.13□□□□□ -0.79
CXCL12-208ENST00000496375 SUMO1P63165 101 aaKnown RBP10.13□□□□□ -0.79
CXCL12-208ENST00000496375 GOLT1AQ6ZVE7 132 aa10.13□□□□□ -0.79
CXCL12-208ENST00000496375 EPDR1Q9UM22 224 aa10.13□□□□□ -0.79
CXCL12-208ENST00000496375 PLAC8L1A1L4L8 177 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 SNAPINO95295 136 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 IGLV2-11P01706 119 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 DEFB130BP0DP73 79 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 DEFB130AP0DP74 79 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 AZU1P20160 251 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 GNG5P63218 68 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 SOHLH1Q5JUK2 328 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 PRR9Q5T870 116 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 IQCF2Q8IXL9 164 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 CYB561D1Q8N8Q1 229 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 TMEM75Q8N9X5 138 aa10.12□□□□□ -0.79
CXCL12-208ENST00000496375 C15orf53Q8NAA6 179 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms