RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LINC00477Q96M19 166 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 PSMG3-AS1Q96PY0 264 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 MS4A6AQ9H2W1 248 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 MAP1LC3AQ9H492 121 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 MSRB1Q9NZV6 116 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 SMKR1H3BMG3 65 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 OVOL1O14753 267 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
CMSS1-208ENST00000496116 FAM106AQ4KMX7 169 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 OR10J6PQ8NGY7 276 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 RNF185Q96GF1 192 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 KLK15Q9H2R5 256 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 ZNF580Q9UK33 172 aa8.45□□□□□ -1.06
CMSS1-208ENST00000496116 A0A096LNJ9 63 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 hDV102S1A0JD36 115 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 NCR2O95944 276 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 AVPP01185 164 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 RPL11P62913 178 aaKnown RBP8.44□□□□□ -1.06
CMSS1-208ENST00000496116 PRSS57Q6UWY2 283 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 COL12A1Q99715 3063 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 G0S2P27469 103 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 LOXL1Q08397 574 aaPredicted RBP8.44□□□□□ -1.06
CMSS1-208ENST00000496116 OR8A1Q8NGG7 326 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 C20orf173Q96LM9 149 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 DAZ1Q9NQZ3 744 aaKnown RBP8.44□□□□□ -1.06
CMSS1-208ENST00000496116 C11orf21Q9P2W6 132 aa8.44□□□□□ -1.06
CMSS1-208ENST00000496116 CFAP46Q8IYW2 2715 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 IGHV7-4-1A0A0J9YVY3 117 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 J3QLI3 93 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 SOCS3O14543 225 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 CACNG7P62955 275 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 CFHR3Q02985 330 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 FOXE3Q13461 319 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 SLC25A34Q6PIV7 304 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 Q6ZS46 218 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 GPHB5Q86YW7 130 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 NRGNQ92686 78 aa8.43□□□□□ -1.06
CMSS1-208ENST00000496116 NXT2Q9NPJ8 142 aaKnown RBP8.43□□□□□ -1.06
CMSS1-208ENST00000496116 COX6B1P14854 86 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 GAGE1Q13065 139 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 SPANXN1Q5VSR9 72 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 TMEM208Q9BTX3 173 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 MCRIP2Q9BUT9 160 aaKnown RBP8.42□□□□□ -1.06
CMSS1-208ENST00000496116 RHPN1-AS1Q9BWJ2 59 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 PEF1Q9UBV8 284 aaKnown RBP8.42□□□□□ -1.06
CMSS1-208ENST00000496116 SPG11Q96JI7 2443 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 IGSF10Q6WRI0 2623 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 TRAV21A0A0B4J279 112 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 SNAI2O43623 268 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 LGALS9BQ3B8N2 356 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 LGALS9CQ6DKI2 356 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 SCRT2Q9NQ03 307 aa8.42□□□□□ -1.06
CMSS1-208ENST00000496116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.42□□□□□ -1.06
CMSS1-208ENST00000496116 IGHV4-4A0A075B6R2 117 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 LINC01546A6NGU7 62 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 K7EMT4 169 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 DLEU1O43261 78 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
CMSS1-208ENST00000496116 LCNL1Q6ZST4 164 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 STPG4Q8N801 248 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 PMCHL2Q9BQD1 86 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 GOLT1BQ9Y3E0 138 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 EVI2AP22794 236 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 TFPI2P48307 235 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 DEFB112Q30KQ8 113 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 TM4SF20Q53R12 229 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 SAMD13Q5VXD3 122 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 IFI27L1Q96BM0 104 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 UFC1Q9Y3C8 167 aa8.41□□□□□ -1.06
CMSS1-208ENST00000496116 TRBV7-9A0A0J9YWB2 115 aa8.4□□□□□ -1.06
CMSS1-208ENST00000496116 TGFAP01135 160 aa8.4□□□□□ -1.06
CMSS1-208ENST00000496116 IGHV4-59P01825 116 aa8.4□□□□□ -1.06
CMSS1-208ENST00000496116 PSMB8P28062 276 aa8.4□□□□□ -1.06
CMSS1-208ENST00000496116 PRR9Q5T870 116 aa8.4□□□□□ -1.06
CMSS1-208ENST00000496116 ZFAND2AQ8N6M9 145 aa8.4□□□□□ -1.06
CMSS1-208ENST00000496116 DPF1Q92782 380 aa8.4□□□□□ -1.06
CMSS1-208ENST00000496116 SMPXQ9UHP9 88 aa8.4□□□□□ -1.06
CMSS1-208ENST00000496116 USP9XQ93008 2570 aaPredicted RBP8.4□□□□□ -1.06
CMSS1-208ENST00000496116 TMEM89A2RUT3 159 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 H3BVH4 76 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 J3KRW8 73 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 ID1P41134 155 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 FXYD7P58549 80 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 ACACBO00763 2458 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 IGKV3-7A0A075B6H7 116 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 A0A096LNT2 108 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 S100A4P26447 101 aaKnown RBP8.39□□□□□ -1.07
CMSS1-208ENST00000496116 FCER1GP30273 86 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 TMEM95Q3KNT9 176 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 Q8N8P6 123 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 OR2K2Q8NGT1 345 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 CELSR1Q9NYQ6 3014 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 FLNCQ14315 2725 aa8.39□□□□□ -1.07
CMSS1-208ENST00000496116 GAS8-AS1O95177 125 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 PRB1P04280 392 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 COX8AP10176 69 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 LEPP41159 167 aa8.38□□□□□ -1.07
CMSS1-208ENST00000496116 ASIPP42127 132 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms