RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 Q6ZQT7 251 aa8.84□□□□□ -0.99
PTPRF-214ENST00000496043 WFDC1Q9HC57 220 aa8.84□□□□□ -0.99
PTPRF-214ENST00000496043 LENEPQ9Y5L5 61 aa8.84□□□□□ -0.99
PTPRF-214ENST00000496043 SLAQ13239 276 aa8.83□□□□□ -1
PTPRF-214ENST00000496043 PQLC2Q6ZP29 291 aa8.83□□□□□ -1
PTPRF-214ENST00000496043 Q8TAT8 98 aa8.83□□□□□ -1
PTPRF-214ENST00000496043 CMTM2Q8TAZ6 248 aa8.83□□□□□ -1
PTPRF-214ENST00000496043 VSIG2Q96IQ7 327 aa8.83□□□□□ -1
PTPRF-214ENST00000496043 HYLS1Q96M11 299 aa8.83□□□□□ -1
PTPRF-214ENST00000496043 UPK3BQ9BT76 320 aa8.83□□□□□ -1
PTPRF-214ENST00000496043 OTORQ9NRC9 128 aa8.83□□□□□ -1
PTPRF-214ENST00000496043 A0A096LPF7 62 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 PAX4O43316 350 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 TNP2Q05952 138 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 ZNF415Q09FC8 603 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 TTC32Q5I0X7 151 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 ARL6IP6Q8N6S5 226 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 TMED6Q8WW62 240 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 ST6GAL2Q96JF0 529 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 MRPS16Q9Y3D3 137 aaKnown RBP8.82□□□□□ -1
PTPRF-214ENST00000496043 ALG5Q9Y673 324 aa8.82□□□□□ -1
PTPRF-214ENST00000496043 A0A1W2PPQ1 181 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 EIF3GO75821 320 aaKnown RBP eCLIP8.81□□□□□ -1
PTPRF-214ENST00000496043 IGHV3-53P01767 116 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 MUC21Q5SSG8 566 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 Q6AWC8 147 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 FAM159AQ6UWV7 190 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 OR10G4Q8NGN3 311 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 OR10G9Q8NGN4 311 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 OR10G7Q8NGN6 311 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 SPXQ9BT56 116 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 KRTAP17-1Q9BYP8 105 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 MRPL16Q9NX20 251 aaKnown RBP8.81□□□□□ -1
PTPRF-214ENST00000496043 PRO0255Q9UI72 69 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 HHLA3Q9XRX5 114 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 KIAA1109Q2LD37 5005 aa8.81□□□□□ -1
PTPRF-214ENST00000496043 RAB2AP61019 212 aa8.8□□□□□ -1
PTPRF-214ENST00000496043 MED28Q9H204 178 aa8.8□□□□□ -1
PTPRF-214ENST00000496043 MDFICQ9P1T7 246 aa8.8□□□□□ -1
PTPRF-214ENST00000496043 RPH3ALQ9UNE2 315 aa8.8□□□□□ -1
PTPRF-214ENST00000496043 ICOSQ9Y6W8 199 aa8.8□□□□□ -1
PTPRF-214ENST00000496043 DNAH11Q96DT5 4516 aa8.79□□□□□ -1
PTPRF-214ENST00000496043 TRGV11A0A075B6L2 103 aa8.79□□□□□ -1
PTPRF-214ENST00000496043 BTF3P20290 206 aaKnown RBP8.79□□□□□ -1
PTPRF-214ENST00000496043 FHL2Q14192 279 aa8.79□□□□□ -1
PTPRF-214ENST00000496043 TMEM183BQ1AE95 376 aa8.79□□□□□ -1
PTPRF-214ENST00000496043 ZNF575Q86XF7 245 aa8.79□□□□□ -1
PTPRF-214ENST00000496043 TMEM183AQ8IXX5 376 aa8.79□□□□□ -1
PTPRF-214ENST00000496043 DYNC1H1Q14204 4646 aaKnown RBP8.79□□□□□ -1
PTPRF-214ENST00000496043 PKD1P98161 4303 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 TRGV4A0A0C4DH28 118 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 HMGB3O15347 200 aaKnown RBP8.78□□□□□ -1
PTPRF-214ENST00000496043 PTTG1O95997 202 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 MBP02144 154 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 CRYBA4P53673 196 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 MRPL23Q16540 153 aaKnown RBP8.78□□□□□ -1
PTPRF-214ENST00000496043 GOLT1AQ6ZVE7 132 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 IQCF2Q8IXL9 164 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 RASL10AQ92737 203 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 C8orf49Q96NF6 230 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 AQP10Q96PS8 301 aa8.78□□□□□ -1
PTPRF-214ENST00000496043 TRAV21A0A0B4J279 112 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 C16orf90A8MZG2 172 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 GNRH2O43555 120 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 CDC34P49427 236 aaPredicted RBP8.77□□□□□ -1.01
PTPRF-214ENST00000496043 SERF2P84101 59 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 TDRG1Q3Y452 100 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 HSD17B11Q8NBQ5 300 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 OR2G3Q8NGZ4 309 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 PSMG3Q9BT73 122 aaPredicted RBP8.77□□□□□ -1.01
PTPRF-214ENST00000496043 TREM1Q9NP99 234 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 NAGKQ9UJ70 344 aa8.77□□□□□ -1.01
PTPRF-214ENST00000496043 SERTM2A0A1B0GWG4 89 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 SIVA1O15304 175 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 STAG3L2P0CL84 134 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 STAG3L3P0CL85 134 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 ARL14EPLP0DKL9 152 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 ATP6V0CP27449 155 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 LYPD5Q6UWN5 251 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 NEGR1Q7Z3B1 354 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 RAB24Q969Q5 203 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 ZNF479Q96JC4 524 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 KRTAP1-5Q9BYS1 174 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 MUC4Q99102 2169 aa8.76□□□□□ -1.01
PTPRF-214ENST00000496043 TRAV8-1A0A0A6YYK1 113 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 M0R2P5 195 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 SFTA3P0C7M3 94 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 GNG5P63218 68 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 RGS21Q2M5E4 152 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 INO80EQ8NBZ0 244 aaPredicted RBP8.75□□□□□ -1.01
PTPRF-214ENST00000496043 SUN5Q8TC36 379 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 ASB13Q8WXK3 278 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 TVP23CQ96ET8 276 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 KCNS1Q96KK3 526 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 NDFIP1Q9BT67 221 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 ACTR3CQ9C0K3 210 aaPredicted RBP8.75□□□□□ -1.01
PTPRF-214ENST00000496043 TNFSF18Q9UNG2 199 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 PKHD1P08F94 4074 aa8.75□□□□□ -1.01
PTPRF-214ENST00000496043 IGHV3-16A0A0C4DH30 117 aa8.74□□□□□ -1.01
PTPRF-214ENST00000496043 K7EQM0 130 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms