RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 PRR9Q5T870 116 aa14.22□□□□□ -0.13
ATG3-208ENST00000495756 GFI1BQ5VTD9 330 aa14.22□□□□□ -0.13
ATG3-208ENST00000495756 BAGE2Q86Y30 109 aa14.22□□□□□ -0.13
ATG3-208ENST00000495756 EIF4E3Q8N5X7 224 aaKnown RBP14.22□□□□□ -0.13
ATG3-208ENST00000495756 TRBV20OR9-2A0A075B6H5 130 aa14.21□□□□□ -0.13
ATG3-208ENST00000495756 RNASE4P34096 147 aaKnown RBP14.21□□□□□ -0.13
ATG3-208ENST00000495756 TMEM183AQ8IXX5 376 aa14.21□□□□□ -0.13
ATG3-208ENST00000495756 CSNK1G2-AS1Q8NCQ2 148 aa14.21□□□□□ -0.13
ATG3-208ENST00000495756 INSP01308 110 aa14.2□□□□□ -0.14
ATG3-208ENST00000495756 BTN1A1Q13410 526 aa14.2□□□□□ -0.14
ATG3-208ENST00000495756 SMUG1Q53HV7 270 aa14.2□□□□□ -0.14
ATG3-208ENST00000495756 COX8CQ7Z4L0 72 aa14.2□□□□□ -0.14
ATG3-208ENST00000495756 NHLRC2Q8NBF2 726 aa14.2□□□□□ -0.14
ATG3-208ENST00000495756 SMIM7Q9BQ49 75 aa14.2□□□□□ -0.14
ATG3-208ENST00000495756 MLST8Q9BVC4 326 aa14.2□□□□□ -0.14
ATG3-208ENST00000495756 C7orf71A4D174 169 aa14.19□□□□□ -0.14
ATG3-208ENST00000495756 ZNF727A8MUV8 499 aa14.19□□□□□ -0.14
ATG3-208ENST00000495756 C9JCJ5 164 aa14.19□□□□□ -0.14
ATG3-208ENST00000495756 Q6ZWC4 215 aa14.19□□□□□ -0.14
ATG3-208ENST00000495756 SBSPONQ8IVN8 264 aa14.19□□□□□ -0.14
ATG3-208ENST00000495756 TRAV12-3A0A0B4J271 114 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 GCGP01275 180 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 SFTA3P0C7M3 94 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 DEFB135Q30KP9 77 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 SOHLH1Q5JUK2 328 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 ZC2HC1AQ96GY0 325 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 PGPEP1LA6NFU8 196 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 IGLV2-8P01709 118 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 RBMY1A1P0DJD3 496 aaKnown RBP14.18□□□□□ -0.14
ATG3-208ENST00000495756 RBMY1CP0DJD4 496 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 ZNF80P51504 273 aaPredicted RBP14.18□□□□□ -0.14
ATG3-208ENST00000495756 RBMY1FQ15415 496 aaKnown RBP14.18□□□□□ -0.14
ATG3-208ENST00000495756 FAM74A3Q4VXF1 159 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 SMIM12Q96EX1 92 aa14.18□□□□□ -0.14
ATG3-208ENST00000495756 ZNF324O75467 553 aaPredicted RBP14.17□□□□□ -0.14
ATG3-208ENST00000495756 Q6AWC8 147 aa14.17□□□□□ -0.14
ATG3-208ENST00000495756 Q6ZQT7 251 aa14.17□□□□□ -0.14
ATG3-208ENST00000495756 C1orf158Q8N1D5 194 aa14.17□□□□□ -0.14
ATG3-208ENST00000495756 RCHY1Q96PM5 261 aa14.17□□□□□ -0.14
ATG3-208ENST00000495756 B9D2Q9BPU9 175 aa14.17□□□□□ -0.14
ATG3-208ENST00000495756 C20orf144Q9BQM9 153 aa14.17□□□□□ -0.14
ATG3-208ENST00000495756 RNF183Q96D59 192 aa14.16□□□□□ -0.14
ATG3-208ENST00000495756 NIPSNAP3BQ9BS92 247 aa14.16□□□□□ -0.14
ATG3-208ENST00000495756 GOLT1BQ9Y3E0 138 aa14.16□□□□□ -0.14
ATG3-208ENST00000495756 TRAV21A0A0B4J279 112 aa14.15□□□□□ -0.14
ATG3-208ENST00000495756 PFN1P07737 140 aaKnown RBP14.15□□□□□ -0.14
ATG3-208ENST00000495756 CRIP1P50238 77 aa14.15□□□□□ -0.14
ATG3-208ENST00000495756 ZNF705AQ6ZN79 300 aaPredicted RBP14.15□□□□□ -0.14
ATG3-208ENST00000495756 OCC1Q8TAD7 63 aa14.15□□□□□ -0.14
ATG3-208ENST00000495756 TMEM208Q9BTX3 173 aa14.15□□□□□ -0.14
ATG3-208ENST00000495756 DNAH9Q9NYC9 4486 aa14.15□□□□□ -0.14
ATG3-208ENST00000495756 TMEM218A2RU14 115 aa14.14□□□□□ -0.15
ATG3-208ENST00000495756 MGST1P10620 155 aaKnown RBP14.14□□□□□ -0.15
ATG3-208ENST00000495756 TMEM256Q8N2U0 113 aa14.14□□□□□ -0.15
ATG3-208ENST00000495756 TM2D3Q9BRN9 247 aa14.14□□□□□ -0.15
ATG3-208ENST00000495756 TP53TG1Q9Y2A0 90 aa14.14□□□□□ -0.15
ATG3-208ENST00000495756 LY96Q9Y6Y9 160 aa14.14□□□□□ -0.15
ATG3-208ENST00000495756 TENM3Q9P273 2699 aa14.14□□□□□ -0.15
ATG3-208ENST00000495756 COL7A1Q02388 2944 aa14.13□□□□□ -0.15
ATG3-208ENST00000495756 IGHV3OR16-12A0A075B7B8 117 aa14.13□□□□□ -0.15
ATG3-208ENST00000495756 H7BYZ3 331 aa14.13□□□□□ -0.15
ATG3-208ENST00000495756 SPRY2O43597 315 aa14.13□□□□□ -0.15
ATG3-208ENST00000495756 TMEM241Q24JQ0 296 aa14.13□□□□□ -0.15
ATG3-208ENST00000495756 FAM162BQ5T6X4 162 aa14.13□□□□□ -0.15
ATG3-208ENST00000495756 LINC01587Q99440 93 aa14.13□□□□□ -0.15
ATG3-208ENST00000495756 FABP5P3A8MUU1 101 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 K7EN84 100 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 PRR27Q6MZM9 219 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 OVOL2Q9BRP0 275 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 RETNQ9HD89 108 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 NAT8Q9UHE5 227 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 SH2D1AO60880 128 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 NDUFA5Q16718 116 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 LINC01551Q86U37 167 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 SLC7A5P1Q8MH63 180 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 SPATA25Q9BR10 227 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 PYGO2Q9BRQ0 406 aa14.12□□□□□ -0.15
ATG3-208ENST00000495756 OR5I1Q13606 314 aa14.11□□□□□ -0.15
ATG3-208ENST00000495756 OR11H2Q8NH07 326 aa14.11□□□□□ -0.15
ATG3-208ENST00000495756 BIN3Q9NQY0 253 aa14.11□□□□□ -0.15
ATG3-208ENST00000495756 C11orf21Q9P2W6 132 aa14.11□□□□□ -0.15
ATG3-208ENST00000495756 ADCYAP1P18509 176 aa14.1□□□□□ -0.15
ATG3-208ENST00000495756 MUC21Q5SSG8 566 aa14.1□□□□□ -0.15
ATG3-208ENST00000495756 NAGKQ9UJ70 344 aa14.1□□□□□ -0.15
ATG3-208ENST00000495756 X6R8D5 127 aa14.1□□□□□ -0.15
ATG3-208ENST00000495756 HUWE1Q7Z6Z7 4374 aaKnown RBP14.1□□□□□ -0.15
ATG3-208ENST00000495756 IGHV1OR15-1A0A075B7D0 117 aa14.09□□□□□ -0.15
ATG3-208ENST00000495756 F8W036 122 aa14.09□□□□□ -0.15
ATG3-208ENST00000495756 PRM2P04554 102 aa14.09□□□□□ -0.15
ATG3-208ENST00000495756 HTN1P15515 57 aa14.09□□□□□ -0.15
ATG3-208ENST00000495756 RPL23P62829 140 aaKnown RBP14.09□□□□□ -0.15
ATG3-208ENST00000495756 FAM159AQ6UWV7 190 aa14.09□□□□□ -0.15
ATG3-208ENST00000495756 LINC00467Q9BRT7 94 aa14.09□□□□□ -0.15
ATG3-208ENST00000495756 SDF2L1Q9HCN8 221 aa14.09□□□□□ -0.15
ATG3-208ENST00000495756 ZNF705GA8MUZ8 300 aaPredicted RBP14.08□□□□□ -0.16
ATG3-208ENST00000495756 TDRG1Q3Y452 100 aa14.08□□□□□ -0.16
ATG3-208ENST00000495756 NEU1Q99519 415 aa14.08□□□□□ -0.16
ATG3-208ENST00000495756 SEC11CQ9BY50 192 aa14.08□□□□□ -0.16
ATG3-208ENST00000495756 ZMAT4Q9H898 229 aa14.08□□□□□ -0.16
ATG3-208ENST00000495756 C19orf71A6NCJ1 209 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms